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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… Successful Community Science Program (CSP) Applications Webinar inviting researchers to submit white papers to the CSP  New … JGI staff to clarify key points about JGI’s capabilities, technical feasibility, and relevance to the DOE’s mission.  … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship internship program between the DOE … alumni, and other staff gathered at the Integrative Genomics Building, the JGI’s home at Berkeley Lab, as …
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Webinar: PhycoCosm Tutorial
… Learn more about JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics … your Tree ever differ from NCBI Taxonomy? A(nswer): If you find that our trees are incorrect or need to be changed, please contact us and we’ll … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Webinar: SIP technologies at EMSL and JGI
… Molecular Sciences Laboratory (EMSL) and the Joint Genome Institute (JGI) provide access to a variety of tools that … 1. Q(uestion): How much DNA is required for the JGI SIP metagenomics pipeline? A(nswer):  The more the better. We want … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
… Laboratory (EMSL) co-hosted a JGI Engagement: Accessing Resources at Multiple DOE User Facilities with a Single … inviting researchers to apply for access to multiple genomics and molecular characterization capabilities in just … be competitive. Q:  Can you elaborate on the single-cell genomics capabilities? A:  EMSL’s capabilities include laser …
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2024 Progress Report
… The Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems … who made use of our data. We completed 39,870 projects in FY24 We generated 871 Terabases of sequence We … advanced genomic capabilities. This year we brought online the latest short-read technology, the Illumina NovaSeq X …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… Team develops a computational pipeline to sift and characterize RNA virus sequences.  A zoo … in Israel, the National Center for Biotechnology Information, and the U.S. Department of Energy (DOE) Joint … the paper, of the uncovered viral diversity. “Although the technical challenges of data analysis at this scale are …
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Nikos Kyrpides
… Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the … microbial genomes and metagenomes (IMG). He became the Metagenomics Program head in 2010 and has the combined Microbial … the genome analysis and Bioinformatics core at Integrated Genomics Inc. in Chicago, IL. He did his postdoctoral …
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Biodesign
…   The Joint Genome Institute's Biodesign Platform capabilities support researchers exploring how to convert sequence into functional assessments. This is done by synthesizing … sequence design for assembly by Gibson, Yeast recombination and Golden Gate methods …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… of two C. citriodora subspecies broaden understanding of the terpene synthase gene family across eucalypt lineages. The Science From the distinct smell of eucalyptus to the flavor of wine, terpenes are … DP110101621), and an Australian Government Research Training Program Scholarship. Sequencing and assembly data …
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Busting the Unbreakable Lignin
… of plant components   The Science There are three main ingredients to tackle when it comes to breaking down a plant … conducted RNA sequencing and alignment to the reference fungal  genome . The study’s pivotal NMR (nuclear magnetic … The authors acknowledge their funding sources: Office of Biological and Environmental Research …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… around the country recognize that crop varieties grow best in certain regions. Most plant species have adapted to their … of interest.” The combination of field data and genetic information has allowed the research team to associate climate … sites. “This paper is a combination of really cutting-edge genomics and genetic analysis with large scale data …
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