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Fungal Friends or Foes in Plant Roots
… host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with … yields for both food and for candidate bioenergy feedstock crops. Summary A plant is like an office building, its roots … these other plant-fungal relationships, an international team led by graduate student Fantin Mesny in Stéphane …
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Effects of Polar Light Cycle on Microbial Food Web
Populations of Antarctic lake microbial communities change with the … with light availability. A long-running time-series study offers a first glimpse into a full season’s cycle of this … water up top and anoxic water below. Cavicchioli and his team took samples from all three sections of the stratified …
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Boosting Small Molecule Production in Super “Soup”
… still work in cell-free environments? (Spoiler: Yes.) Think of cells as tiny factories: within their walls they have … structure into a cell-free system. The work complements efforts to further develop sustainable alternative … The work started with yeast strains engineered by Alper’s team to convert the sugar glucose to the products including …
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Kjiersten Fagnan
… closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in … 2018, Dr. Fagnan was part of the Gordon Bell prize winning team at the Supercomputing conference, SC’18, led by … where she leads infrastructure and user-centered design efforts. … PhD Applied Mathematics University of Washington, …
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Katherine Louie
… production for community sequencing projects and heads R&D efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass … Beyond profiling over 10k samples/year, Dr. Louie and her team work with other JGI scientists in development of new, …
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Computationally Classifying Fungal Lifestyles
… genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that … and many plant pathogens known to infect most major food crops and feedstocks for biomass and biofuel production. … regarding the effects of climate change. Summary A team led by researchers at the U.S. Department of Energy …
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Alabama A&M Interns Access An Abundance of Knowledge
… mentors Yi Zhai and John Vogel on researching the effects of Brachypodium distachyon plant root exudates on the plant … is Dr. Yi Zhai, and I’m currently working on the effect of plant root exudates in the rhizosphere and microbiome. … genomics, because this work is essential for improving crop resilience through climate change. Ti’Yanna Watson: The …
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Secondary Metabolites Advisory Committee
… on the effective management and strategic objectives of the programs. The Committee serves as the Program's key external advisory panels and advocates of Program strategy, operations, and scientific relevance … functions nor do they direct the Programs’ management teams on how to operate and manage the particular Science …
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Fungal & Algal Program User Advisory Committee
… on the effective management and strategic objectives of the Program. The Committee serves as the Program's key external advisory panels and advocates of Program strategy, operations, and scientific relevance … functions nor does it direct the Programs’ management teams on how to operate and manage the Program.   …
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JGI@25: The Little Alga That Could
In honor of the JGI's 25th anniversary in 2022, we have revisited a … was primed to participate when the JGI launched its effort to produce a full sequence of the Chlamydomonas … has applications in both biofuel and pharmaceuticals. The team at Merchant’s lab also discovered the existence of …
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Evolution of a Fungal Gene Expression Regulator
Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. The … their genomes, but is not well understood in fungi. A team of researchers reported on the largest analysis of 5mC … help researchers find ways to protect poplar and other crops being considered for bioenergy feedstock development. …
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DNA Synthesis Science User Advisory Committee
… on the effective management and strategic objectives of the programs. The Committee serves as the Program's key external advisory panels and advocates of Program strategy, operations, and scientific relevance … functions nor do they direct the Programs’ management teams on how to operate and manage the particular Science …
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