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… To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the … the JGI Plant Gene Atlas in  Nucleic Acids Research . The project spans 15 years and involves more than 17 research … is reposted here in modified format; their conversation has been lightly edited and condensed below.   Sarah Sharman:  …

… In honor of the JGI's 25th anniversary in 2022, we have … Viral Genomics Group Lead at the JGI.  To understand the microbiome systems underpinning a broad range of … been somewhat invisible to the sampling experiments probing Earth’s ecosystems. Viruses rarely grow well in …

… Rainforests store a big fraction of all the carbon on Earth, and soil microbes play a key role in pulling that carbon out of the atmosphere. This episode, …

… Trained on environmental data, a new JGI tool more accurately … Berkeley National Laboratory (Berkeley Lab), led the project. He explained that large language models—artificial … ecological Harvard Forest project, large datasets from soil microbiome studies collected across various terrains, and …

… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development of novel computational tools to … B.S. in Microbiology, Université Blaise Pascal, France M.S. in Data Analysis and Modeling for Life Sciences, Université …

… and collaborators.  Ms. Ballon is a molecular biology-trained science communicator with extensive experience shaping compelling narratives for diverse audiences. In her prior role as a … Click to see the coverage of JGI-enabled science highlighting user research, newly accepted proposals, and outreach …

… EMSL and JGI announce FY 2020 collaborative FICUS projects. Through the Facilities Integrating Collaborations for User Science (FICUS) program, … on an aspect of the  Phenotypic Response of the Soil Microbiome to Environmental Perturbations   under PNNL’s … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… By studying the structure and function of a cyanobacterial protein, … — but the experts we were able to work with on this project to ask questions about structure and function,” … from UC Berkeley professor and longtime JGI collaborator Sabeeha Merchant’s group. In 2011, they inventoried a swath of …

… for new technology development and JGI user science projects. We perform analysis for diverse experiment types, with main focus areas being genome variation, transcriptomics and … Our group also performs ‘proof-of principle’ research projects to demonstrate new genomic capabilities. Our group …

… Multiple 2021 HPCwire Awards ” on the Berkeley Lab Computing Sciences site. Lawrence Berkeley National Laboratory … went to the Berkeley Lab team comprised of JGI and ExaBiome Project team, supported by the DOE Exascale Computing … that supports “an unprecedented assembly of environmental microbiomes.” JGI’s Chief Informatics Officer  Kjiersten …

… research, the health sciences and related fields who are interested in learning and sharing concepts, tools and … research results in genomics, metagenomics and the human microbiome. The workshop will train participants in … training in the use of the Integrated Microbial Genomes & Microbiomes (IMG/M) system, presented by Natalia Ivanova and …