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Access to Rock Star Scientists
… helpfulness and patience of my JGI PIs, having lots of data to play around with.” …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… team mined more than 8,500 publicly available metagenome datasets generated from sampling sites around the world, including data from several DOE-mission relevant proposals through … a multi-step approach to mine, bin and then filter the data for the major capsid protein (MCP) to identify NCLDV …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
Berkeley National Laboratory, has unveiled these motility tools in hot spring  Chloroflexota .  Ocean-dwelling  …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… results showed that these fungi may be able to provide tools beyond biomass breakdown, extending into biochemical …
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A Collaboration to Improve Plant Genome Annotations Across Species
… to link experimental evidence across species. Centralized databases with large-scale transcriptome projects such as … is an updateable resource. To demonstrate that, we included datasets from two species, one of which is sweet sorghum Rio … seven more groups joined the project to contribute to the data for six new species. I must mention that some of the …
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2023 Progress Report
… we provide advanced genomic capabilities, large-scale data, and professional expertise to support the global …
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Frederik Schulz
… eukaryotic microbes and viruses in environmental sequence data. Dr. Schulz employs multi-omics (metagenomics, …
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Genome Sequence of the Mesophilic Thermotogales Bacterium Mesotoga prima MesG1.Ag.4.2 Reveals the Largest Thermotogales Genome To Date
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Functional analysis of Salix purpurea genes support roles for ARR17 and GATA15 as master regulators of sex determination
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Uncovering Novel Genomes from Earth’s Microbiomes
… and research scientist in Nikos Kyrpides’  Microbiome Data Science group. “What makes this study really stand out … Adding Value Beyond Genome Sequences Much of the data had been generated from environmental samples  … Eloe-Fadrosh noted that it was a nice example of “big-data” mining to gain a deeper understanding of the data and …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… be specific to species or groups of species.  The genome data also revealed that green millet was introduced into the … and Adam Healey, two of the co-first authors, led the data analyses and assembled the green millet “pan-genome” (a … hudsonalpha.org. … Reference genome of Setaria viridis … Datasets …
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JGI@25: From Life at the Extremes to Editing Genomes
… past few years they have partnered with JGI’s Microbiome Data Science group led by Nikos Kyrpides , mining the … immense collection of publicly accessible metagenomic datasets from a wide variety of ecosystems around the world, …
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