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The White-Rot Basidiomycete Dichomitus squalens Shows Highly Specific Transcriptional Response to Lignocellulose-Related Aromatic Compounds

Global transcriptome response to ionic liquid by a tropical rain forest soil bacterium, Enterobacter lignolyticus

Nitrite Oxidizer Activity and Community Are More Responsive Than Their Abundance to Ammonium-Based Fertilizer in an Agricultural Soil

Soil Microbes Trade-Off Biogeochemical Cycling for Stress Tolerance Traits in Response to Year-Round Climate Change

The epsomitic phototrophic microbial mat of Hot Lake, Washington: community structural responses to seasonal cycling

Triphenyltin degradation and proteomic response by an engineered Escherichia coli expressing cytochrome P450 enzyme

Prediction, enrichment and isolation identify a responsive, competitive community of cellulolytic microorganisms from a municipal landfill.

Comparative transcriptomics and metabolomics reveal specialized metabolite drought stress responses in switchgrass (Panicum virgatum)

Morphogenesis, starvation, and light responses in a mushroom-forming fungus revealed by long-read sequencing and extensive expression profiling

Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date

… The team identified 15 core genes shared across all fungi, and found that some of these genes have moved from … public databases and recovered more than 3,000 others from environmental datasets. All of the annotations and data are … reference set, using two additional approaches. To search environmental data, they developed a two-stage metagenomic …

Leo Baumgart

… wide range of JGI user science projects spanning bacteria, fungi, and plants. His team is also developing single-nuclei … et al. "A multi-omic characterization of the physiological responses to salt stress in S cenedesmus obliquus UTEX393." …

Tracing the Evolution of Shiitake Mushrooms

… New genomes highlight the diversity of white rot fungi in the genus Lentinula The Science Shiitake … — the shii tree, a Japanese relative of the oak. These fungi are part of the genus Lentinula, which have evolved to … those samples, this study also tracks the enzymes these fungi use to break down wood, and compares genetic diversity …

Lawrence Berkeley National Laboratory is a U.S. DOE Office of Science
national laboratory managed by the University of California.