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SPRUCE-ing Up Science
… the DOE Joint Genome Institute (JGI)-UC Merced internship program, Lawrence is now a postdoctoral researcher at the … of biology and computer science, to reveal clues about how microbial and bacteria communities influence the … on his PhD program at UC Merced in 2013, this field was just beginning to develop and expand into the world of …
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Daniel van der Lelie
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An Integrated Dataset to Understand Ecosystem Interaction
… time. By collecting data from 27 different poplar ( Populus trichocarpa ) trees, as well as the soil surrounding … wildlife habitats and water-quality regulation. Focusing on the rhizosphere and interactions between the trees, … ) is supported by the Genomic Science Program in the U.S. Department of Energy, Office of Science, …
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Green Algae Reveal One mRNA Encodes Many Proteins
Gene expression in eukaryotes was long held to be monocistronic – that is, a … Academy of Sciences , a team of researchers has found numerous examples of polycistronic expression – in which two or … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Berkeley Lab and the Environmental …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… yield and climate resilience of algae — for potential use as biomass or in biomass conversion to biofuel. Summary … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Engineering Research Council of Canada (NSERC) Discovery program grants to C.L. Support from the Canada First …
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Nikos Kyrpides
Joint Genome Institute in 2004 to lead the Genome Biology Program and the development of the comparative analysis … at Argonne National Laboratory. Dr. Kyrpides’ research focus on Microbiome Research with an emphasis on Microbiome … of Earth’s microbiomes. Nature Biotechnol . 39(4):499-509 Danko D, et al. 2021. A global metagenomic map of urban …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
New studies show methanogenesis is not exclusively for Euryarchaeota. Atmospheric levels of methane, a … as a principal investigator through the Community Science Program — as well as through the Facilities Integrating … Alternate Metabolic Pathways And there is something special about these new lineages recently tied to methanogenesis. …
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Tracking the Origins of Methane-Producing Microbes
… the total global methane production. They are thought to use billions of tons of the carbon dioxide trapped in … this approach through the Emerging Technologies Opportunity Program (ETOP). Following that work, they partnered once … did not belong to the Euryarchaeota, the archaeal “superphylum” where this type of methanogenesis is typically …
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Graduate Students Get Thesis Research Opportunity at the JGI
… the DOE Office of Science Graduate Student Research (SCGSR) program awards graduate students the opportunity to pursue … at one of the DOE national laboratories or national user facilities. As a result of the latest call , a total of … UC Merced School of Natural Sciences. “I’m deeply concerned about climate change and this is a remarkable opportunity to …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… going forward. Watch this short video (below) to hear more about the summer from their own perspectives. The interns … JGI mentors are listed below, along with their project focus areas: Undergraduate Interns Andrew Lin and mentor Vy … Sonia Vargas and mentors Tomas Tyml and Frederik Schulz, Eukaryotes in Extreme Environments Theo Loreaux and mentors …
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Benjamin Cole
Prior to joining the Joint Genome Institute, his focus was primarily on how plants interpret different light cues by altering their growth program, and on how plants coordinate their gene expression … day. At the Joint Genome Institute, Dr. Cole’s research focus has been on understanding how microbes can colonize plant …
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Streamlining Regulon Identification in Bacteria
… sigma factors that initiate transcription in bacteria. Using this technology, which combines an in vitro … that control transcription. Summary Transcription in eukaryotes is handled by three distinct RNA polymerases; in … Both are members of the JGI’s Secondary Metabolite Science Program, which Mouncey leads. RIViT-seq is a three-step …
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