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Operating Expenses
… FY2025 Spending Profile The JGI is funded primarily by the DOE Office of Biological and Environmental Research (BER), a program within the DOE Office of Science. …
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Green Algae Reveal One mRNA Encodes Many Proteins
… a single protein. Recently reported in the Proceedings of the National Academy of Sciences , a team of researchers has found numerous examples of polycistronic expression – in which two or … Berkeley, UCLA, UC Davis, Brookhaven National Laboratory, Lawrence Berkeley National Laboratory, the U.S. Department …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… This webinar focused on how the JGI employs single-molecule, long-read DNA … to aid with genome assembly and transcriptome analysis of microbial, fungal, and plant research projects.  More … analysis as well as improving metagenome assemblies. Q&A from the Webinar: Input & sequencing Q(uestion): How much …
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Massie S. Ballon
… and outreach efforts, the team aims to broaden awareness of and access to JGI public resources and the DOE mission, … as help cultivate the next generation of genomic research users, partners, and collaborators.  Ms. Ballon is a molecular biology-trained science communicator with extensive experience shaping …
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An Addiction Crucial to a Fungus’ Reproduction
… A fungus relies on bacteria to regulate key components of its … as a mutualist, where both species of organism benefit from association, but was predicted to have evolved from a … and a part of the oil-producing Mucoromycotina group, about which little is known. The Cornell team cultivated and …
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Lost in translation: What we have learned from attributes that do not translate from Arabidopsis to other plants
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Phytozome: Tutorial Workshop from 2022 CROPS Conference @HudsonAlpha
… Phytozome is the Plant Comparative Genomics portal of the Department of Energy Joint Genome Institute, and facilitates accurate …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring … (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab) … data sets of RNA sequences (metatranscriptomes) generated from diverse environmental samples around the world, …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… scale: fungi stretch a network of tendrils called arbuscules into a plant’s root cells, and both organisms … as a reservoir for carbon compounds that plants generate from carbon dioxide they take in. In this way, encouraging … circular capture areas roughly 55-microns in diameter — about the width of a human hair. At such resolution, this …
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Graduate Students Get Thesis Research Opportunity at the JGI
… at one of the DOE national laboratories or national user facilities. As a result of the latest call , a total of 70 graduate students from 52 universities were selected to carry out part of … UC Merced School of Natural Sciences. “I’m deeply concerned about climate change and this is a remarkable opportunity to …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab) through … on microalgal communities across different ocean latitudes from pole to pole, using metatranscriptome and metagenome …
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A Collaboration to Improve Plant Genome Annotations Across Species
… specific conditions – in over a dozen plants. To learn more about the project, HudsonAlpha’s Research Communication Manager Sarah Sharman recently interviewed study first author Avinash Sreedasyam, a HudsonAlpha … It was developed to improve plant genome annotations at the US Department of Energy (DOE) Joint Genome Institute (JGI)*, …
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