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Eelgrass Proves to Be Much Younger Than We Thought
… years less than previously believed.  The Science Eelgrass, one of the most abundant plants in the ocean, originated in Japan before spreading around the globe. Now, …
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Marcel Huntemann
Marcel is in charge of several production pipelines (gene calling, functional annotation and methylomics) that run on … exchange and assists with large scale computations on R&D projects. …
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JGI User Executive Committee Expands
Committee (UEC) of the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … environments. He’s been involved in several plant genome projects through the Community Science Program. As a UEC … on various CSP and FICUS collaborative science proposals. One of his interests as a UEC member is increasing user …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
A group led by JGI scientists have made strides in improving and applying a method that allows researchers … Biology. (Wayne Keefe/Berkeley Lab) For example, the JGI first used CRAGE to engineer domesticated bacterial strains … can be used to create compounds more efficiently than one strain could on its own.  In work published in  …
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Honey Bee Gut Microbiota Divvy Up Dinner
Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex polysaccharides. Honey bees are invaluable pollinators — cupids of the plant … the pectin and hemicellulose — are digested further along: first, the pectin, mainly by  Gilliamella ; then the …
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Matthew Kellom
Matt is broadly interested in the interactions between microbial life and environment, and … interest. Matt also supports various CSP and FICUS user projects for the Metagenome Program. …
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Neha Varghese
Neha’s key role is to design, benchmark, and apply bioinformatics software to enable analysis and interpretation of genomic and metagenomic data for JGI’s … community. She also provides support for user science and projects through implementation of advanced analysis …
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Gone with a trace: cataloguing the disappearing gut microbes
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Learning to Look
Machine learning approach significantly expands inovirus … display. The search tool Roux and his colleagues developed first worked on a reference dataset that included genome … said virologist Mart Krupovic of the Institut Pasteur, one of the study co-authors and an expert on inoviruses. …
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Picking Up Threads of Cotton Genomics
Analysis reveals cotton genome stability across global lineages . Come harvest time, the cotton fields look like … from this high impact science for years to come,” said Don Jones, who handles variety improvement for  Cotton … added. “We must be careful who we ask to take on these projects due to their difficulty and complexity, but we have …
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Meeting Code of Conduct
… staff of the JGI events are required to adhere to the following Code of Conduct. Event organizers will enforce this Code … are expected to be familiar with this policy. Our aim in hosting an event is to build a stronger community. Our goal is to create an environment where everyone feels welcome to participate, speak up, ask questions, …
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A Community Resource for Secondary Metabolite Researchers
Collaboratory encourages user engagement. The Science In addition to the core set of "primary metabolites"—chemical compounds shared by most living creatures for energy, growth and reproduction—most … ( smc.jgi.doe.gov ) is designed with two main objectives. First and foremost, it is a BGC repository that aspires to …
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