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Streamlining Regulon Identification in Bacteria
… transcription factors with their target genes. The Science Regulons are a group of genes that can be turned on … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Both are members of the JGI’s Secondary Metabolite Science Program, which Mouncey leads. RIViT-seq is a three-step …
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A toolkit for microbial community editing
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Effects of Polar Light Cycle on Microbial Food Web
… lake microbial communities change with the seasons. The Science Light-harvesting bacteria (phototrophs) in … Ace Lake were collected over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published … (Berkeley Lab). The work was enabled by the JGI’s Community Science Program. For most months each year, Ace …
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The Power of One, Amplified
… single cell genomics complements metagenomics studies. The Science Researchers demonstrated the value of conducting … For example, they showed that the composition of the community was similar across sequencing approaches, that … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Making a Lichen Together
… and alga to understand their partnership more clearly. The Science The humble lichen is a superorganism: one being that … colleagues worked with Igor Grigoriev, the Fungal & Algal Program lead at the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility. Grigoriev and …
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A Step Toward Controlling Soybean Rust
… percent. As part of the DOE Joint Genome Institute’s  2016 Community Science Program portfolio , Sebastien Duplessis of the … to counter soybean rust disease. Soybean itself is a  JGI Flagship plant genome , and JGI  published its genome …
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CSP New Investigator Call
… is for investigators and research initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, … mission relevance , proposed data usage by the applicant/community, and track record of the applicant.  Learn about … design, please contact Tanja Woyke, Deputy for User Programs. Technical and Scientific Leads will also be …
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Sediment microbial communities in Great Boiling Spring are controlled by temperature and distinct from water communities
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Co-occurrence networks reveal more complexity than community composition in resistance and resilience of microbial communities
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
On July 8, JGI’s DNA Synthesis Science group held a  JGI Engagement: Accessing Functional … Webinar inviting researchers to submit white papers to the Community Science Program’s  Functional Genomics call for …
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Model Fern Reveals Insight into DNA Thievery in Ferns
Open Green Genomes hits milestone with C. richardii The Science Fern genomes are huge, and incredibly complex — … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … on the Open Green Genome Initiative in 2018 as part of its Community Science Program. The OGG has set out to generate …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… when it comes to breaking down tough plant fibers. The Science Walk in a temperate forest filled with Norway spruce … UniProt, exist, are not specific enough for a microbial community like that from a temperate coniferous forest floor … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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