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10 From JGI on the 2019 Highly Cited Researchers List
… established community gardens of switchgrass plants in 10 different field sites on a north-south gradient across the … (GSC), and the International Committee on Taxonomy of Viruses to outline the minimum amount of information for an …
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Publication Policy
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… samples — from plants, algae, bacteria, archaea, fungi, viruses — to support scientists around the world. Most of …
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JGI on the 2021 Highly Cited Researchers List
… colleagues used an extensive JGI database to investigate viruses detected in the samples. Simon Roux co-organized the … on how to best capture and characterize uncultivated viruses, understand the role of viruses in natural ecosystems, and functionally explore …
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Virus-Microbe Interactions of Mud Island Mangroves
I wanted to incorporate that CSP, but also look at how viruses might be influencing the methane cycling within … wetlands.” A chapter of Rambo’s research focuses on how viruses influence carbon cycling in coastal mangroves. His … school plans. “The SCGSR gave me some great insight into my career path,” he said. “I much preferred the …
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A Collaboration to Improve Plant Genome Annotations Across Species
… include six more species, so in total, we are looking at 18 different species, which included over 2000 RNA Seq … sets, such as sorghum internode time course data from 4 different genotypes by Dr. John Mullet; Dr. Tom Juenger and … more plants are studied? Avinash:   JGI puts huge efforts into generating reference genomes for new species allowing …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… have evolved mix-and-match characteristics — creating many different ways of processing nitrogen. To boost crops more … proteins, as well as recycling nitrogen. Now, with insight into a specific enzyme class that’s important to the way … of enzymes. It’s useful to differentiate these enzyme tools into two groups: core metabolism and specialized …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… and characterize viral diversity, understand the role of viruses in natural ecosystems, and functionally explore … and large-scale data analysis to better characterize how viruses infect soil microbes and influence how soil …
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User Executive Committee Charter
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The biogeographic differentiation of algal microbiomes in the upper ocean from pole to pole
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… the forest floor. For the first time, they compared three different fungal guilds in a range of different locations. … found in soil samples, and assembled those RNA transcripts into a metatranscriptome. Overall, they found that despite … and mycorrhizal symbionts have historically been divided into separate ecological niches — recyclers and …
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UC Merced Interns Reflect on Their JGI Summer Projects
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