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JGI on the 2021 Highly Cited Researchers List
Jeremy Schmutz Susannah Tringe Tanja Woyke Below are a few projects each of these researchers were involved in, … JGI staff who mentored students this past year, through programs including the JGI-UC Merced Genomics Internship … a series of webinars featuring aspects of the Integrated Microbial Genomes & Microbiomes (IMG/M) Nikos Kyrpides was …
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Katherine Louie
… manages metabolomics production for community sequencing projects and heads R&D efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass spectrometry-based … Rocha UN, Shi S, et al. Dynamic root exudate chemistry and microbial substrate preferences drive patterns in …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… scientist Simon Roux , who was recently selected as the 2025 recipient of the Microbiome Data Prize by the American … and management best practices that have advanced the microbial sciences. The Prize also recognizes innovative and … as part of the Early Career Research Program (ECRP). His project, “Characterizing Virus-Driven Alterations of …
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A Powerful Technique to Study Microbes, Now Easier
Pett-Ridge collaborated with JGI scientists on an ambitious project: to bring in robots to help process experiments that measure microbial activity in soil. Now, the researchers and robots …
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How Microbes Can Protect Plants in Drier Straits
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… to study both sides of this interaction up close, using RNA sequencing to understand gene expression: one of the … to date. This paper  is the cover article for the April 2024 issue  of  Nature Plants .  “We wanted to better … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Dynamic root exudate chemistry and microbial substrate preferences drive patterns in rhizosphere microbial community assembly
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Metagenomic Sequencing of an In Vitro-Simulated Microbial Community
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High-resolution phylogenetic microbial community profiling
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A Comparison of Microbial Genome Web Portals
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The Integrated Microbial Genome Resource of Analysis
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Access to Rock Star Scientists
Paropkari, Vicente Ramirez and Rhondene Wint had summer 2018 internships in Walnut Creek. The students’ research … JGI Mentors : Ben Cole & Axel Visel, Genomics of Plant-Microbial Interactions “The summer internship has further … by passionate scientists working on interdisciplinary projects. I feel inspired to pursue a career in STEM. …
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