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… FICUS projects. Through the Facilities Integrating Collaborations for User Science (FICUS) program, two Department of … California, Berkeley studies the alga  Chlamydomonas reinhardtii , one of the JGI’s Flagship genomes. She and her … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …

… Gene expression in eukaryotes was long held to be monocistronic – that … mRNA – in two species of green algae, Chlamydomonas reinhardtii and Chromochloris zofingiensis . “I was scrutinizing … The work was partly enabled by the “Facilities Integrating Collaborations for User Science” (FICUS) collaborative …

… In honor of the JGI's 25th anniversary in 2022, we have … a number of notable achievements that showcase our collaborations and capabilities to enable great science that … it shares nearly 7,000 genes with other organisms (a third of those shared by both humans and flowering plants). Its …

… University of Texas at Austin, will defend his dissertation. Some of his research was conducted at the JGI through … Graduate Student Research (SCGSR) program , which awards graduate students the opportunity to pursue part of … and saw great potential in the academic and industry collaborations taking place. I am planning to enter the …

… Uncovering associations between plant roots and fungi that can help or harm … Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with genomes from other … team led by graduate student Fantin Mesny in Stéphane Hacquard’s group at the Max Planck Institute for Plant Breeding …

… Methane is a greenhouse gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea likely played a … reconstructed from these 10 metagenome-assembled genomes (MAGs) representing new potential methanogenic, anaerobic … of Science User Facility located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …

… Webinar held November 5, 2020 (watch the  video below, captions are available) spotlighted the metabolomic analysis … mass spectrometry-based measurements of primary and secondary metabolites from plants, microorganisms, and … the metabolomics and transcriptomic data? A:  We use MAGI. Reference: Erbiligin et al.  MAGI: A Method for …

… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, … any feature updates. Phytozome  v13, which now hosts upwards of 250 plant genomes and has been under active … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …

… Congratulations to Jane Grimwood, who has been appointed the Loretta Purdy Spencer Chair in Genomics at the HudsonAlpha Institute … Library Construction group for the JGI Plant Program . Her collaborations with the JGI began soon after the JGI was …

… Through advances in sequencing technologies and computational approaches, more and more virus sequences are being recovered and identified from environmental samples (metagenomes). However, the quality and … sequences vary widely. In a previous effort, an international consortium recommended specific guidelines and best …

… decoded the genome of an oil-producing green alga, and demonstrated precise gene targeting in the genome in the … also simplifies metabolic modeling and pathway optimization for enhanced lipid production. Also notable, researchers found it is missing 33 genes …

… the New Lineages of Life Group. His research is focussed on the discovery of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. Dr. Schulz employs multi-omics … various user projects in the Microbial Program. In an LDRD-funded project, Dr. Schulz established a …