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Mindfully Moving JGI
… JGI is in the process of shifting its operations from Walnut Creek to the heart of … Deputy Ray Turner. How extensive? Consider that the process of moving 250 people and their equipment from 4 … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Candidatus Prosiliicoccus vernus, a spring phytoplankton bloom associated member of the Flavobacteriaceae
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Metatranscriptomic insights on gene expression and regulatory controls in Candidatus Accumulibacter phosphatis
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Candidatus Abditibacter, a novel genus within the Cryomorphaceae, thriving in the North Sea
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A Powerful Technique to Study Microbes, Now Easier
… on an ambitious project: to bring in robots to help process experiments that measure microbial activity in soil. …
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An Automated Tool for Assessing Virus Data Quality
… (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a … to help researchers assess and improve the quality of metagenome-assembled viral genomes . The Impact The … contamination from the host organism. As reported in Nature Biotechnology , a team from the U.S. Department of Energy …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… crop and ornamental seeds sold for the upper Midwest are often very different than those bred for Texas. Identifying and breeding varieties that have high … of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology (HudsonAlpha), and the U.S. Department of …
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Toward More Efficient Artificial Photosynthesis
… (MPI) for Terrestrial Microbiology and the University of Bordeaux have developed a platform that mimics … harnesses carbon captured from the atmosphere in a process that generates energy. The MPI team ultimately aims … remove carbon from the atmosphere than current natural processes and use it as a sustainable resource for making …
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Chomping Toward Better Plastic Recycling
… We know all kinds of things about plastic – except, how to break it down for … So researchers are taking a look at how these critters process plastic, to improve plastic recycling by following …
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Promoting the Power of Viral Metagenomics
… An article summarizing the field of viral metagenomics, authored by JGI researchers Lee … , was  recently published in the journal  Annual Review of Biomedical Data Science . The following guest piece was … even deep-sea hydrothermal vents – and computationally identifying which sequences represent viruses that were …
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Boosting Small Molecule Production in Super “Soup”
… Yeast strains engineered for the biochemical conversion of glucose to value-added products are limited in chemical … of enzymes (during growth) and the biochemical production process (in cell-free reactions), this framework enables … powerful at finding ways to accelerate bio-design and identifying the best sets of enzymes that enable synthesis …
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Kjiersten Fagnan
… closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in 2016, and in 2018 was hired to be the JGI’s … Methodologies workshops. In 2018, Dr. Fagnan was part of the Gordon Bell prizewinning team at the Supercomputing …
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