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What Happens Underground Influences Global Nutrient Cycles
… features prominently among the eleven proposals selected with four focused on biofuels and bioproducts. For example, … on an aspect of the  Phenotypic Response of the Soil Microbiome to Environmental Perturbations   under PNNL’s … expected to be expert users on all of the scientific instruments. Instead, members of the scientific staff from both …
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Silver age of GOLD introduces new features
… a flagship  genomic metadata repository, making curated microbiome metadata that follows community standards freely … the appropriate contextual information, or metadata, stored with them. GOLD provides manually curated metadata resources … project organization system implemented in GOLD consist of: Studies, Biosample/Organisms, Sequencing Projects and …
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JGI Scientists Pen Genome Watch Articles
… published January 27, is about engineering plants and their microbiomes for more sustainable agriculture and was written … Seshadri. Writing the  Nature   Reviews column all started with an email in 2018.  Tanja Woyke , who leads the  … Du Toit, senior editor for  Nature Reviews Microbiology, with an unusual opportunity: would JGI researchers consider …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… at Lawrence Berkeley National Laboratory, have collaborated with global researchers on projects related to understanding … Human Virome Program .  Nikos Kyrpides , head of the JGI’s  Microbiome Data Science , leads one project with JGI … classifying viruses into groups that can be compared across studies, (ii) predicting which hosts these viruses are …
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Multi 'omics comparison reveals metabolome biochemistry, not microbiome composition or gene expression, corresponds to elevated biogeochemical function in the hyporheic zone
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A molecular survey of Australian and North American termite genera indicates that vertical inheritance is the primary force shaping termite gut microbiomes
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Multiple Maize Reference Genomes Impact the Identification of Variants by Genome‐Wide Association Study in a Diverse Inbred Panel
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Russulaceae: a new genomic dataset to study ecosystem function and evolutionary diversification of ectomycorrhizal fungi with their tree associates
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PCR and Omics Based Techniques to Study the Diversity, Ecology and Biology of Anaerobic Fungi: Insights, Challenges and Opportunities
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Transcription Factor Family-Based Reconstruction of Singleton Regulons and Study of the Crp/Fnr, ArsR, and GntR Families in Desulfovibrionales Genomes
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… of California Santa Barbara. So plants don’t break down without a fight, but it’s an important battle to fine-tune. … the energy they store.      Since 2012, O’Malley has worked with the JGI to understand the enzymes these organisms use … processing. “So if you peer inside a poop sample, or a rumen sample, you’re going to find beautiful diversity.” …
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Natural Prodcast Episode 9: Roger Linington
… in making this happen. We had a really fun conversation with Roger about all this, in terms of how to build an … technology and the improvement in sensitivity of those instruments. And that’s been followed by developments in pulse … environmental roles of these compounds? Can we perform studies such as looking at the distributions of different …
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