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Brachypodium model system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … more than once, and these events took place a million years apart: the individual with a maternal  B. distachyon …

The  National Ecological Observatory Network (NEON) is a network of … Through the  “Facilities Integrating Collaborations for User Science” (FICUS) call between the JGI and the  … Find out more about the FICUS program at:  jgi.doe.gov/user-programs . Q:  How can I get that NEON Biorepository …

… is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first … a similar single-cell genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His … probing metagenomics. mSystems 8:e01280-22. Volland et al. 2022.   A centimeter-long bacterium with DNA contained in …

… metagenomic sequencing and single-cell sequencing. For years, extracting single cells and then amplifying their DNA for genome sequencing was no easy task. The traditional way of collecting them is through a method called … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …

… working for the Stanford Human Genome Center, now the HudsonAlpha Institute for Biotechnology. There he constructed … simple yeasts to large vertebrate genomes.  For the past 13 years, Mr. Schmutz has directed the JGI Plant Program, … their impact on cotton improvement. Nature Genetics 52: 525-533. Lovell, JT et al. 2018. The genomic landscape of …

Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … and the IMG/M team developed several updates and features to mine the GEM catalog. ( Watch this IMG webinar …

… natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth (Toby) Kellogg and other researchers at the … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …

… the field, work at the lab bench, and also do some computational analyses at their desks. As part of the DOE JGI’s efforts to promote diversity and inclusion in the sciences, among the interns were two undergraduate students and two …

… recognize that crop varieties grow best in certain regions. Most plant species have adapted to their local … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … genomic regions of interest and directly introduce these features into new crop varieties. “It’s going to be …

RIViT-seq technology could speed up associating transcription factors with their target genes. The Science Regulons are … coelicolor . The Impact As an integrative genome science user facility, connecting genes to functions is part of the … That work published in Nature Communications on June 17 , 2022, was conducted by JGI Director Nigel Mouncey and …

… chromosomes of  Miscanthus arose by ancient hybridization (polyploidy) and insights into the dynamics of gene … its prodigious capability for growth. While many desirable features of biofuel grasses can be studied from simpler (and … DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …

… high-performance computing resources, an upcoming hackathon led by the Oak Ridge Leadership Computing Facility … (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, aims to explore applications in the life sciences that can be ported to the GPU …