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The Roseibium album (Labrenzia alba) Genome Possesses Multiple Symbiosis Factors Possibly Underpinning Host-Microbe Relationships in the Marine Benthos
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Comparative genomics of the genus Desulfitobacterium
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Mike Sneddon
… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome Institute. His team … Liu, O., Akiva, E., Eyles, T. H., Galm, U., Ganesh, S., Hendrix, S. … MW, Pontius, W, and Emonet, T. Stochastic coordination of multiple actuators reduces latency and improves chemotactic …
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Sequence variants in the HLX gene at chromosome 1q41‐1q42 in patients with diaphragmatic hernia
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Accelerating Metagenomics Discoveries with Deep Learning
… On July 6, scientists from Lawrence Berkeley National Laboratory (Berkeley Lab) and … learning, data is passed through algorithms organized into multiple interconnected layers. The architecture of these … of proteins in order to conduct more efficient protein sequence alignments. He also aims to detect structural …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… A new view into a symbiosis could offer benefits to address … soil and boosting biofuel feedstocks with less fertilizer. For millions of years, underground fungi have lived in … understanding of this symbiosis could offer improvements in multiple directions. On the fungi side, underground …
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Enabling pan-repository reanalysis for big data science of public metabolomics data
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JGIota: Looking Back at Sequencing for Soybeans
… The soybean is a crop that could boost biofuels and fertilize fields. … So in 2010, the JGI helped publish the original genome sequence for the soybean, Glycine max. With a full genome sequence, …
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Examples: Successful LOIs & Submissions
… See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, as well as successful submissions to … Linking lignin engineering to drought stress resilience: RNA-seq and metabolomic insights in lignin biosynthetic pathway …
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Learning to Look
… Machine learning approach significantly expands inovirus … answer the question, “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters … first worked on a reference dataset that included genome sequences known to be affiliated with the Inoviridae. “What …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… Understanding the shared genetic toolkit of ancestral and … to spread across most of the plant’s ecosystems. The Impact For decades, the liverwort  M. polymorpha has been used as a … framework provided by these high quality reference genome sequences could help researchers better understand related …
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A comparative genomics screen identifies a Sinorhizobium meliloti 1021 sodM-like gene strongly expressed within host plant nodules
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