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Time‐series metatranscriptomes reveal conserved patterns between phototrophic and heterotrophic microbes in diverse freshwater systems
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KARRIKIN INSENSITIVE2 regulates leaf development, root system architecture and arbuscular‐mycorrhizal symbiosis in Brachypodium distachyon
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Spacer2PAM: A computational framework to guide experimental determination of functional CRISPR-Cas system PAM sequences
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Optimized CRISPR Interference System for Investigating Pseudomonas alloputida Genes Involved in Rhizosphere Microbiome Assembly
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Discarded diversity: novel megaphages, auxiliary metabolic genes, and virally encoded CRISPR-Cas systems in landfills
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Yasuo Yoshikuni
… the power of DNA synthesis, strain engineering, and biosystems design for DOE-mission-relevant discovery and … At the JGI, Dr. Yoshikuni also manages the Synthetic Biology Pathway Engineering group. His research focus … startup, Bio Architecture Lab, Inc. (BAL), where he used systems and synthetic biology to discover novel pathways …
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Tanja Woyke Elected to American Academy of Microbiology
… Genomics Department Head for the Environmental Genomics and Systems Biology Division of the Lab’s Biosciences Area since … genetic material of uncultivated microbes and link their genomes to the roles they play in the environment. One … from previously understudied clades, establishing their evolutionary relationships and leading to the discovery of …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… Repertoire in Actinobacteria Over the years more than 3,400 genomes have been sequenced from curated DSMZ isolates, for … reactions. For this article alone, more than 600 genomes (dubbed “GEBA-Actino”) were sequenced from DSMZ … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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The complete mitochondrial genome of the conifer needle endophyte, Phialocephala scopiformis DAOMC 229536 confirms evolutionary division within the fungal Phialocephala fortinii s.l. – Acephala appalanata species complex
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Improving the Cacao Genome and Phytozome
… systemic orthology to enable use for both cacao functional biology and breeding.     … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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JGI Workshops at PAG
… breadth of algal diversity, the numbers of sequenced algal genomes, and the quality of those genomes, is rising. The … developments at the JGI and KBase toward integrative biology and hear from researchers who are applying genomic … sequence information to BER funded activities of plant systems. We will describe how to apply for a project with …
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Does time matter? Intraspecific diversity of ribosomal RNA genes in lineages of the allopolyploid model grass Brachypodium hybridum with different evolutionary ages
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