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Improving the Cacao Genome and Phytozome
… Global chocolate brands can’t exist without cocoa According … fungal infections. That’s why Mars, Inc., a maker of chocolate for more than 100 years and one of the world’s … cacao beans – was released by a Mars, Inc.-led consortium through the Cacao Genome Database project. The genome …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species … and Environment (INRAE). Remarkable Similarity Despite Vast Diversity For this study, researchers collected soil samples … “In the next few years, I think we will have a kind of global map of the fungal diversity, but we are still missing …
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JGI Early Career Researchers Featured in mSystems Special Issue
… In a special issue of mSystems , out May 14, 2019, JGI researchers are among … nature. In the last few years, mapping the planet’s viral diversity has advanced drastically, aided by genome assembly … be the foundation upon which researchers can develop high-throughput and high-resolution studies of interactions …
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John Vogel
… years where he was a driving force behind the development of numerous genomic resources that fostered the widespread … conducts comparative genomic research to understand the evolutionary and practical significance of plant pan-genomes including understanding polyploid genome evolution in a pan-genomic context. …
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Gene family expansions and transcriptome signatures uncover fungal adaptations to wood decay
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Uncovering novel functions of the enigmatic, abundant, and active Anaerolineae in a salt marsh ecosystem.
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Activity-targeted metaproteomics uncovers rare syntrophic bacteria central to anaerobic community metabolism
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
…   The Science Scientists have fully decoded the genome of an oil-producing green alga, and demonstrated precise … to a mule, but that is still able to reproduce asexually through mitosis. The alga naturally produces high amounts of … be deleted opens new engineering possibilities. The rapid evolution observed suggests directed evolution could quickly …
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Defining a Pan-Genome for Antarctic Archaea
… Analysis of haloarchaeal metagenomes broadens understanding of … their adaptations offers insights into microbial evolution, as well as how Antarctic microbial communities … biotechnological applications. The work has been enabled through the JGI Community Science Program (CSP) . …
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Disclaimer
… resides on a computer system funded by the U.S. Department of Energy. Anyone using this system consents to monitoring of this use by system or security personnel. … neither the United States Government nor the University of California nor any of their employees, makes any …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI … SIP experiments. “I’m looking forward to seeing that come through, predicated on these data standardization efforts — … will help grow and improve high-quality datasets, enabling global insights from modeling, machine learning, and …
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Metagenomics
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