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Conservation and Expansion of Transcriptional Factor Repertoire in the Fusarium oxysporum Species Complex
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iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in what … kinds of ecosystems. However, matching these viral genetic sequences to their hosts is crucial to understanding what … generated many new high-confidence host predictions across a variety of ecosystems. In particular, it predicted …
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Maureen Berg
Maureen is currently developing new high-resolution and high-throughput methods to link uncultivated viruses to their host. With … these new methods, she hopes to expand our understanding of the roles that viruses play in their ecosystems, …
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A Complex Confection Decoded: Sugarcane Reference Genome
Sugarcane was the last major crop without a reference quality … most harvested crop by tonnage, sugarcane accounts for 80% of global sugar production. A reference genome for the … Community Science Program; in 2018, a monoploid reference sequence of sugarcane was published as a step forward in …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
On September 1, JGI held a JGI Engagement: Pro Tips for Successful Community Science … by September 21, 2020, will be included in the next review. Q&A from the Webinar: Q(uestion): Can people can mix … in their proposal as long as they’re staying under the sequence cap? A(nswer): Proposals that are looking at …
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Plant compartment and biogeography affect microbiome composition in cultivated and native Agave species
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Genomic analysis of three Bifidobacterium species isolated from the calf gastrointestinal tract
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Transcriptomic Analysis of the CAM Species Kalanchoë fedtschenkoi Under Low- and High-Temperature Regimes
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The core metabolome and root exudation dynamics of three phylogenetically distinct plant species
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Ecological divergence of syntopic marine bacterial species is shaped by gene content and expression
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Genetic architecture of floral traits in bee‐ and hummingbird‐pollinated sister species of Aquilegia (columbine)
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
A group led by JGI scientists have made strides in improving … domesticate some 60 strains, inserting into them a genetic sequence that acts as a “landing pad.” Mouncey adds, “Once … different gene deletions in four gammaproteobacterial species, and then removing the editing machinery afterward …
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