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Model Choice, Missing Data, and Taxon Sampling Impact Phylogenomic Inference of Deep Basidiomycota Relationships.
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IMG/VR v.2.0: an integrated data management and analysis system for cultivated and environmental viral genomes
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IMG/M v.5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes
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Integrating Microbial Community Data Into an Ecosystem‐Scale Model to Predict Litter Decomposition in the Face of Climate Change
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Global Archaeal Diversity Revealed Through Massive Data Integration: Uncovering Just Tip of Iceberg
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… Accepted proposals emphasize JGI interests in algae and … 80 full proposals, resulting from 95 letters of intent. For the first time, 63 percent of the accepted proposals … & Algal Program . For example, green algae represent the largest group of primary producers generating organic …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… Researchers looked across many organisms to see that … molecules. So they’re involved anytime you make an amine-based molecule — a very critical role,” he said. These … organisms have developed metabolisms that function with a toolkit of enzymes. It’s useful to differentiate these …
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SPRUCE-ing Up Science
… A former JGI intern is now applying his internship lessons … researcher at the Oak Ridge National Laboratory (ORNL), based in Oak Ridge, Tennessee. Recently, Lawrence, in … fine tune his approach. “I got a lot of that from Zhong.”   Publication: Carrell AA et al. Habitat-adapted microbial …
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Socotra Island the forgotten fragment of Gondwana: Unmasking chameleon lizard history with complete mitochondrial genomic data
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Webinar: SIP technologies at EMSL and JGI
… The Environmental Molecular Sciences Laboratory (EMSL) and the Joint Genome … from the Webinar: 1. Q(uestion): How much DNA is required for the JGI SIP metagenomics pipeline? A(nswer):  The more … want to call it. But NanoSIMS can do that at a really fine scale, and we can also easily measure the 15N at the bulk …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… The JGI Engagement Webinar held November 5, 2020 (watch the  video … Science Program (CSP) . This includes mass spectrometry-based measurements of primary and secondary metabolites from … involved? How long does it take to do all the analyses? A:  For the JGI  New Investigator and  Functional Genomics …
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Leo Baumgart
… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, … biology and microfluidics at the University of California, San Diego. As the Sequencing Technology … handling and bioinformatics pipelines to transition bench-scale methods into production workflows. He developed and …
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