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Supporting FAIR Scientific Workflows with the JGI Analysis Workflow Service (JAWS)
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Pangenome analysis of Liriodendron reveals presence/absence variations associated with growth traits
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Doubling Down on Known Protein Families
… Using a novel computational approach, researchers confirm … online Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach … Research Center  Alexander Fleming. “This was a massive analysis of 1.3 billion proteins with massively parallel …
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Comparative plastome genomics and phylogenomics of Brachypodium: flowering time signatures, introgression and recombination in recently diverged ecotypes
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Phylogenomically Guided Identification of Industrially Relevant GH1 β‑Glucosidases through DNA Synthesis and Nanostructure-Initiator Mass Spectrometry
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Phylogenomic Analyses Indicate that Early Fungi Evolved Digesting Cell Walls of Algal Ancestors of Land Plants
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A User-Centered Approach to Accessing JGI Data
… When the JGI Data Portal (https://data.jgi.doe.gov/) launched last year, … through the plant portal  Phytozome . Now the portal offers a way for users to more easily access public data … requires that users know about the FY Funding Year, and the publication status in addition to the public/private status. …
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… The JGI was honored to host some of the brightest minds in genetics … the sea, that you all know,” Vardi shared. Crucial for the global carbon cycle, photosynthetic phytoplankton do not … Her lab has leveraged bioinformatics in computational analysis to identify and characterize TEs, developing …
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Expanding Virophage Diversity
… Virophages are small viruses with double-stranded DNA genomes that … including over 28,000 unique MCP sequences.  Further analysis led to the identification of 328 “high quality” … to 12-39. “Overall,” the team concluded, “we provide a global analysis of the diversity, distribution, and …
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Building Sphagnum Genomic Resources
… Sphagnome data would enable researchers’ insights on their … Science Program (CSP), researchers are developing a number of resources to build up Sphagnum as a plant model system … food or fuel applications. The Impact Sphagnum’s impact on global carbon cycling and climate is estimated to be larger …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… From August 21-23, 2023, attendees joined the JGI Annual Genomics … – DNA sequencing, synthesis, metabolomics, data analysis, and new technology developments – has advanced … more interested in microbes with the potential to impact global climate change, he said. “To understand the …
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Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2T) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and
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