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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… JGI sequences around 35,000 samples — from plants, algae, bacteria, archaea, fungi, viruses — to support scientists …
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Four Researchers Join JGI User Executive Committee
… of Energy user facility located at Lawrence Berkeley National Laboratory. Holly Bik of the University of Georgia, … Program over the past decade in gene regulatory network projects supported by the CSP, and as part of microbiome … development and initiation of the Genomic Encyclopedia of Bacteria and Archaea (GEBA) project. As a UEC member, he …
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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. … able to carry out a broader analysis than had ever been done before to look at how multiple forest fungi have independently evolved to establish symbiotic relationships with plants (mycorrhizae), and particularly how …
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Natural Prodcast Episode 9: Roger Linington
… back for episode 9 of Natural Prodcast. This week, Alison and I talk to Roger Linington, from Simon Fraser … and doing medicinal chemistry, doing development of projects on a project-by-project basis. And the more time has gone on, the … This episode features our conversation with Roger Linington , from Simon Fraser …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… In a recent  Nature Genetics paper , researchers focused on the full composition of genes, or pangenome, of the model plant  Marchantia … plant lineages in the  Open Green Genomes Initiative , a project supported by the U.S. Department of Energy (DOE) … Energy operated under contract no. DE-AC02-05CH11231. This project received funding from the European Research Council …
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JGIota: Looking Back at Methane-Making Microbes
… We count on livestock for food and fiber, but raising these animals … produces an atmosphere-warming gas: methane. Those emissions mainly come from gut microbes — the bacteria and archaea breaking down plant matter. So since …
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Crysten Blaby-Haas
… University of Florida, working with Valérie de Crécy-Lagard on using comparative genomics to predict gene function in bacteria and leveraging molecular biology and reverse … – present Alumni Award, MCS, University of Florida, 2024 Congressional Recognition, Women’s Services Honoree, 2022 …
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Supercharging SIP in the Fungal Hyphosphere
… stable isotope probing helps ID novel interactions between bacteria and fungi The Science Researchers have … fungi, researchers identified novel interactions between bacteria and the fungi. The Impact Stable isotope probing is … Work at Lawrence Livermore National Laboratory was conducted under the auspices of the U.S. …
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Bacterial Microcompartments
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10 From JGI on the 2019 Highly Cited Researchers List
… Clarivate Analytics, formerly the IP & Science arm of Thomson Reuters, has released their 2019 list of Highly Cited … of 21 fields appear on the 2019 list. Congratulations to: Project Manager Kerrie Barry, Cross-Field Category Fungal … , Biology & Biochemistry category Some highlights from projects each of these researchers were involved in that …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… In honor of the JGI's 25th anniversary in 2022, we have … first closed and finished genome derived from an uncultured bacterial single cell – a symbiont of the green … populations in oxygen minimum zones identified SAR11 bacteria as initiators of nitrogen loss in these waters. The …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… Congratulations to Tanja Woyke, who has been awarded the van Niel International Prize for Studies in Bacterial Systematics for the triennium 2017-2020! …
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