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You Can Move, But You Can’t Hide
… mobile genetic elements like plasmids and viruses. The Science Mobile genetic elements (MGEs) are genetic entities … National Laboratory (Berkeley Lab), with computing resources provided by NERSC, another user facility at Berkeley … cycles around them. By understanding more about the genomics of MGEs and their evolution at the cellular level, …
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JGI Launches Latest Strategic Plan
… has begun to the June dedication event of the Integrative Genomics Building—the new home of the JGI and KBase in the … — A Vision for Integrative and Collaborative Genome Science , the culmination of an eight-month intensive … and incubation process. “JGI’s ‘vision’ is truly a tour de force,” said Mary Maxon, Biosciences Associate …
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Fungal Endophytes of Populus trichocarpa Alter Host Phenotype, Gene Expression, and Rhizobiome Composition.
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Kingdom-Wide Analysis of Fungal Protein-Coding and tRNA Genes Reveals Conserved Patterns of Adaptive Evolution
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Fungal community assembly in drought-stressed sorghum shows stochasticity, selection, and universal ecological dynamics
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A fungal transcription factor essential for starch degradation affects integration of carbon and nitrogen metabolism
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Fungal ecological strategies reflected in gene transcription ‐ a case study of two litter decomposers
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Reactive iron, not fungal community, drives organic carbon oxidation potential in floodplain soils
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Fungal community response to long‐term soil warming with potential implications for soil carbon dynamics
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A Natural Mechanism Can Turbocharge Viral Evolution
… allows microbes to adapt to changing environments. The Science The first step in the deadly dance between a virus … who led the research team and is the head of the Viral Genomics group at the JGI, thinks that if you’re a virus or … under contract no. DE-AC02-05CH11231. This research used resources of the National Energy Research Scientific Computing …
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Finding the Fermenters
Harnessing BER-funded data resources, researchers built an interactive and comprehensive database of fermentative prokaryotes. The Science Most organisms use oxygen to convert food into … the literature. They then used the JGI’s GOLD and IMG data portals to get information about the genomes and genes of …
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Busting the Unbreakable Lignin
… fungi can degrade the hardiest of plant components   The Science There are three main ingredients to tackle when it … yield fuels, and removing lignin in order to do so is a resource-intensive process. Now, a new study shows how … conducted RNA sequencing and alignment to the reference fungal  genome . The study’s pivotal NMR (nuclear magnetic …
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