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Jeremy Schmutz
… directed finishing and co-led the team that finished the DOE human chromosomes 5, 16, and 19. Following the … Program, focusing on the organization of community driven science for JGI Plant Flagship Genomes and DOE relevant cellulosic feedstocks. He provides scientific …
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Game On: High School Students Drive Everglades Metagenomics Study
… class at Florida’s Boca Raton Community High School. The course had a defined set of objectives, and started with an … Metagenome Program Head at the  U.S. Department of Energy (DOE) Joint Genome Institute (JGI) , a DOE Office of Science User Facility. She took special interest in it …
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JGI & KBase at PAG XXVII
… 12-16, 2019, in San Diego, Calif. Representatives from the DOE Joint Genome Institute (JGI) and the  DOE Systems … representatives from KBase and the JGI about collaborative science opportunities. Learn how to apply for a project with … and how you can use the KBase system to accelerate your plant genomics research. Click here to download a list …
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Joe Ecker
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JGI@25: Fueling Investigation into Methane-Making Microbes
… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental ch allenges. Methane emissions are a massive factor driving climate change. …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… as input. Data analysis Q:  What types of analysis support does JGI provide for DNA modification detection? A:  DNA … PacBio reads (i.e., reads with very low error rate), so our pipeline performs long-reads-only assemblies and not … Depending on the project setup, we can include as part of our data analysis plan mapping of short-reads datasets …
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An Addiction Crucial to a Fungus’ Reproduction
… regulate key components of its reproductive machinery The Science To better understand how beneficial organisms … University and scientists at the Joint Genome Institute, a DOE Office of Science User Facility was conducted to … As these oil-producing fungi are potential sustainable sources of alternative fuels, so understanding …
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JGI Advisory Committee
… such as the User Executive Committee, the DNA Synthesis Science User Advisory Committee, the Fungal and Algal …
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You Can Move, But You Can’t Hide
… mobile genetic elements like plasmids and viruses. The Science Mobile genetic elements (MGEs) are genetic entities … at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley … National Laboratory (Berkeley Lab), with computing resources provided by NERSC, another user facility at Berkeley …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… of peat moss drives insight into carbon storage   The Science Boggy peatlands, which hold much of the Earth’s … as carbon sinks and minimize their role as carbon sources. Summary Sphagnum, a genus of just under 400 mosses … decompose in peatlands, and so carbon within their tissues doesn’t return to the atmosphere. Peat bogs also serve the …
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DAP-seq Drives Robust Mapping of Gene Regulation
… scale of data enabled by these approaches creates a vast resource offering researchers the ability to chart regulatory … plant lineages. Aligning with U.S. Department of Energy (DOE) interests, this advancement holds the potential to … at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Expanding Virophage Diversity
… viruses. Almost all known virophage genomes share only four genes in common: major and minor capsid proteins (MCP … Microbiome , researchers from the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science facility, have increased the number of known high …
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