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The Peach v2.0 release: high-resolution linkage mapping and deep resequencing improve chromosome-scale assembly and contiguity
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Population Level Analysis of Evolved Mutations Underlying Improvements in Plant Hemicellulose and Cellulose Fermentation by Clostridium phytofermentans
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Improved Gene Annotation of the Fungal Wheat Pathogen Zymoseptoria tritici Based on Combined Iso-Seq and RNA-Seq Evidence.
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Phytozome: Tutorial Workshop from 2022 CROPS Conference @HudsonAlpha
… Biotechnology. Phytozome is the Plant Comparative Genomics portal of the Department of Energy Joint Genome Institute, and facilitates accurate and insightful …
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Tour the IGB
… Take a virtual tour of the IGB, home of the DOE Joint Genome Institute. To navigate virtual tours of each floor, …
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Statement on the Use of Genomics Data
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is committed to advancing the field … of its user community to NCBI as well as to the  data portals that the JGI manages, immediately after data … to consider policy changes in coordination with its stakeholder at the DOE Office of Biological and Environmental …
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Evolution of a Fungal Gene Expression Regulator
… in fungi. The Science Changing an A, C, T or G in a genome sequence can lead to changes in protein structures … of specific 5mC methyltransferase (MTase) variants. Using new sequencing technologies for producing both reference … genome-wide regulation and cataloging them in JGI’s fungal portal MycoCosm. …
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JGI Workshop at SIMB NP Meeting
… Jan. 7: New Capabilities to Study Secondary Metabolism   Although … a given BGC in various hosts, availability of sequenced genomes, and computing resources needed to predict BGCs from … of Science User Facility, has been developing and applying new genomics capabilities that address these issues. Check …
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The genome of the polar eukaryotic microalga Coccomyxa subellipsoidea reveals traits of cold adaptation
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JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
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What Happens Underground Influences Global Nutrient Cycles
… Molecular Sciences Laboratory (EMSL) and the  DOE Joint Genome Institute (JGI)—have selected 11 proposals for … alga  Chlamydomonas reinhardtii , one of the JGI’s Flagship genomes. She and her colleagues have generated a … their FICUS proposal include assessing the distribution of genome-derived functional traits through the soil profile …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… more than 30% in terms of quantity and thickness. Replacing older, thicker ice with younger, thinner ice means more … sequencing from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … the adaptive mechanisms of Arctic microalgae but also opens new avenues for utilizing these organisms in sustainable …
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