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MGM Workshop at Fisabio Summer School 2025
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Protocol for condition-dependent metabolite yield prediction using the TRIMER pipeline
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Expanding Virophage Diversity
… the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science facility, have increased the … more than 14,000 publicly available metagenomic datasets in JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Picking Up Threads of Cotton Genomics
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Nature Genetics include Jane Grimwood and Jeremy Schmutz of JGI’s  Plant Program , both faculty investigators at the … methods of breeding into cotton,” said Schmutz, who heads JGI’s Plant Program. He and Grimwood were also part of the …
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Charting Progress toward Professional Goals
… on meaningful lessons from their summer experiences at the JGI Berkeley Lab offers a variety of programs to help … scientist Deanna Beatty sat down with interns hosted at the JGI through three different internship programs – some … research, hopefully, if I get in with them this coming fall and spring term. Deanna Beatty: Congratulations. That's …
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The Expanding Universe of Methane Metabolisms in Archaea
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, for publicly … of Life Symposium in April, which immediately precedes the JGI’s 14th Annual Genomics of Energy & Environment Meeting. … Registration for both the NeLLi Symposium and for the JGI Annual Meeting closes on March 11, 2019. Novel …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… One Health Ruhr (OHR), and the DOE Joint Genome Institute (JGI), Molecular Biophysics and Integrated Bioimaging (MBIB) … user facilities at Berkeley Lab. Commenting on the visit, JGI Director Nigel Mouncey expressed enthusiasm about the … user facilities located at Berkeley Lab, including the JGI, the National Energy Research Scientific Computing …
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the … to link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the organization … and currently leads the Viral Genomics group at the JGI to further explore the ecological and evolutionary …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … are even less known than DNA viruses,” said Simon Roux , a JGI scientist and one of the project co-leads. “But same as … on mining prokaryotic viruses together, learned from JGI’s Nikos Kyrpides that his Microbiome Data Science group …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship program and current PhD student, … and it feels so rewarding,” Wint said. For Axel Visel, JGI Science Deputy and a co-founder of the internship … Visel explained. She continued working virtually with her JGI mentors for nearly three years after her internship. …
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Waiting to Respire
… of UC Berkeley geomicrobiologist Jill Banfield, a longtime JGI collaborator, postdoctoral fellow Paula Matheus … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, and research … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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