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Identifying the Microbial Cleanup Crew at a Superfund Site
… its way into the groundwater of several communities in New Mexico via leakage from a local dry-cleaner. … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … , they were able to analyze the resulting metagenomic data. (Data from the project are available on the  JGI …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, found that the … of their well-designed sampling and analysis of their data at the time. Following the publication of their paper … to the terrestrial ecosystems exposed fungi to numerous new ecological niches and triggered rapid diversification of …
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IMG-ABC: new features for bacterial secondary metabolism analysis and targeted biosynthetic gene cluster discovery in thousands of microbial genomes
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The Candidate Phylum Poribacteria by Single-Cell Genomics: New Insights into Phylogeny, Cell-Compartmentation, Eukaryote-Like Repeat Proteins, and Other Genomic Features
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Comparative genomics, proteomics and transcriptomics give new insight into the exoproteome of the basidiomycete Hebeloma cylindrosporum and its involvement in ectomycorrhizal symbiosis
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High-quality draft genome sequence of Rhizobium mesoamericanum strain STM6155, a Mimosa pudica microsymbiont from New Caledonia
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Cultivation of novel Atribacterota from oil well provides new insight into their diversity, ecology, and evolution in anoxic, carbon-rich environments
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Non-contiguous finished genome sequence and contextual data of the filamentous soil bacterium Ktedonobacter racemifer type strain (SOSP1-21T)
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Expanding Virophage Diversity
… the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science facility, have increased the … By mining more than 14,000 publicly available metagenomic datasets in JGI’s  Integrated Microbial Genomes & … of 328 “high quality” (based on completeness) diverse new virophage genomes containing all four core genes. These …
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You Can Move, But You Can’t Hide
Researchers at the JGI develop a tool to quickly and accurately identify mobile … created by researchers under the direction of Microbiome Data Science Group Lead Nikos Kyrpides at the U.S. … affect a microbe’s ability to cycle nutrients or produce new chemicals. They can also affect ecosystems by killing …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
The JGI Engagement Webinar held November 5, 2020 (watch the  … long does it take to do all the analyses? A:  For the JGI  New Investigator and  Functional Genomics proposal calls, … it makes its sequencing, synthesis, metabolomics and data analyses capabilities available on a peer-reviewed …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Research journal. The genome portal reinforces the JGI’s new strategic focus on exploring algal biology, diversity, …
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