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Dan Rokhsar
… group, and is past lead of the Eukaryotic Genome Program (2010-2019), and JGI Chief Informatics Officer (2013-2016). Dr. … California, Berkeley in 1989, as a member of the Physics Department and in 2002 he became a Professor of Genetics, … 2018 Marthella Foskett Brown Chair, Computational Biology, UC …
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Year in Review: JGI’s 2018 Progress Report Available Now
… notable research and scientific collaborations in 2018. The cover is an image of Mono Lake, a saline soda lake …
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2022 Progress Report
… also co-located in the IGB. Vision The vision of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE …
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JGI Welcomes New UEC Members
… career stages. The election period concluded on October 21. The results are in and JGI extends a warm welcome to the …
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… to generating thousands to millions of copies of a particular DNA sequence from just a few pieces of DNA. … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by … U.S. Department of Energy under Contract No. DE-AC02-05CH11231. The work was supported by Pacific Northwest National …
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Frederik Schulz
… Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading the New Lineages of Life Group. His … metagenomics. Nature Reviews Microbiology 20: 721 Volland, J.-M. et al. 2022. A centimeter-long bacterium at the interface of simple and complex life. Science . 376: 1453-1458 Nayfach et al. (2021) A genomic catalog of Earth’s …
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Nikos Kyrpides
… (IMG). He became the Metagenomics Program head in 2010 and has the combined Microbial Genomes and Metagenomes Program since 2011. Prior to joining the DOE Joint Genome Institute, Dr. … RNA virome reveals diverse clades of bacteriophages. Cell . 185(21):4023-4037 Nayfach S, et al. (2021) Metagenomic …
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Defining a Pan-Genome for Antarctic Archaea
… in Antarctic lakes, some of which have salinities 10 times that of seawater. To shed light on the global … they also characterized metagenomes (collections of partial genomes) from six hypersaline Antarctic lakes. The … of Halorubrum lacusprofundi from Deep Lake and Rauer 1 Lake, one of the lakes in the nearby Rauer Islands. …
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Rex Malmstrom
… Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ growth rates and carbon consumption of SAR11 bacteria, the most abundant bacterial group in the ocean. … Genome-wide selective sweeps and gene-specific sweeps in natural bacterial populations. ISME Journal 10 (7), 1589 …
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Mike Sneddon
… Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome Institute. His team of … J., Sneddon, M., and Yang, X. Metagenomic library and natural product discovery platform. WO2021163637A1 , PCT application PCT/US2021/018050 (published …
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Mapping the Earth’s Hidden Fungal Kingdom
… in a yet-to-be-deciphered language. Researchers with the Department of Energy (DOE) Joint Genome Institute (JGI)’s … and yeasts, outnumber their ancient relatives by nearly 10 to one in sequenced collections. Yet the early-diverging … for the next generation of scientists. Initiatives like our 1000 Fungal Genomes Project established crucial phylogenetic …
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Introducing New Members of the JGI User Executive Committee
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