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Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, after completing a petascale … her research focused on stable and accurate computational methods for reacting subsurface flows, and evolved into …

… participants in an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or DNA sequencing … learning, data is passed through algorithms organized into multiple interconnected layers. The architecture of these … two vectors,” said Sevim.  While there are alignment-free methods for nucleotide searches, such as  Mash and  BBsketch …

Biotech Partners provides integrated and high-touch programs that empower … academic, and professional development experiences through in-classroom instruction and paid internships sponsored by various …

See below for examples of successful Letters of Intent to our … in a cosmopolitan and abundant soil bacterium: genetic microdiversity or core metabolic flexibility? … Microbial contributions to soil carbon storage during …

Despite their diminutive stature, “short plants” such as mosses could be uniquely powerful in helping scientists link plant genetic sequences to what they do. But sequencing the genome of one short plant — fire moss — had an unexpected …

To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the HudsonAlpha Institute for Biotechnology, which specializes in genome improvement … time course data from two ecotypes of  Panicum hallii and multiple switchgrass ( Panicum virgatum ) experimental data. …

The Science A reference genome sequence and genomic toolkit for the perennial grass Miscanthus sinensis has been … of the genome sequence also provides insights into how the multiple chromosomes of Miscanthus arose by ancient … wild Miscanthus lineages to better understand the genetic diversity of the grass, which could help in optimizing …

… the 2023 Highly Cited Researchers from the JGI recognized for their “significant influence in their chosen field or fields through the publication of multiple highly cited papers during the last decade” by … issue of Nature, the study highlights the vast functional diversity of microbes by looking at protein function within …

Meta-omics datasets show that CRISPR-Cas systems determine mutualism or parasitism between some archaeal hosts and … how these hosts and hitchhikers coexist is key for understanding their impact on wider ecosystems, but … it to usable organic compounds. However, no microbe works alone. Archaea, bacteria, and viruses all operate in concert …