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JGI Earth Month: Wetlands Work in #TenHundredWords
Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially relevant to living on a changing … work on which she is expanding with her study of microbes in California’s manmade water transport canals. …
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The … yields and improving their abilities to adapt to extreme environments such as poor soils and drought. The reference … tetraploid, with four sets of chromosomes; the study showed that these sets descend from two now-extinct progenitors. …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, JGI’s Zhong Wang and … from the School of Natural Sciences and started a program that offered a handful of graduate students summer research … Clarissa Nobile, investigating interactions between microbes and venomous hosts. She also facilitates the …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
Journal publication caps JGI pilot project with fledgling Florida high school scientists. The Florida Everglades … insects hover just above. Described as a “river of grass” that stretches some 580,000 square miles across southern … Everglades in Palm Beach County, and particularly about the microbes that play roles in the methane cycle. Their data …
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2024 Progress Report
The Integrative Genomics Building (IGB) seen above is home to … to provide the foundational biological understanding that opens up new ways to harness biology. This new plan … agenda across our scientific programs, as well as workshops that gave participants hands-on experience with the data …
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High-quality permanent draft genome sequence of Ensifer sp. PC2, isolated from a nitrogen-fixing root nodule of the legume tree (Khejri) native to the Thar Desert of India
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
With a new methodology, scientists are now getting more complete genomic results from single cells. The … easily in the lab. To access the genomes of uncultured  microbes , scientists usually employ two different methods; … Multiple Displacement Amplification, and most genomes that were acquired through it were usually only around 30% …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… the JGI’s 25th anniversary celebration, the 2022 Annual Meeting featured speakers who shared a look back at the JGI’s … Their talks shed light on how the JGI was established, all that it has contributed, and what they’re excited about in … currently works to support understanding of plants, microbes and environmental communities that have relevance …
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Triggering Morel Fruiting
Hao Tan from the Sichuan Academy of Agricultural Sciences in China and involving Francis Martin from the Institut … to seek other ways to make morels fruit under artificial environments, a technique to supply exogenous nutrients was … supply to the soil. In contrast, isotopic evidence showed that morel mycelium colonizing the lignocellulosic-abundant …
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Streamlining Regulon Identification in Bacteria
RIViT-seq technology could speed up associating transcription factors with their target genes. The Science Regulons are a group of genes that can be turned on or off by the same regulatory protein. … ensuring genes vital for growth and survival across various environments are expressed when their functions are needed. …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… to Tanja Woyke, who has been awarded the van Niel International Prize for Studies in Bacterial Systematics for … uncovering the hidden diversity of “microbial dark matter”–that uncultured and unknown majority of microbes in, on and around the planet–through techniques …
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Duplications and losses of genes encoding known elements of the stress defence system of the Aspergilli contribute to the evolution of these filamentous fungi but do not directly influence their environmental stress tolerance
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