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Supercharging SIP in the Fungal Hyphosphere
… High-throughput stable isotope probing helps ID novel interactions between … and fungi The Science Researchers have successfully automated aspects of a commonly-used process for studying … HT-SIP is a capability available to request through  the JGI proposal calls . …
Learn more
From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… For many scientists, the culmination of their work into a written … Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship program and current PhD student, …
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Tina Clarke
… Ms. Clarke joined the Lab in 2007 as the Sr. Human Resources … (JBEI) and in 2017 joined the Joint Genome Institute (JGI). Tina serves in an HR advisory role to Division/Area … and supervisors to recommend solutions and appropriate actions on diverse HR related matters. She began her HR …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… Researchers looked across many organisms to see that aminotransferase enzymes have evolved mix-and-match … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … kingdoms, with archaea having around 15, eubacteria around 25, and eukaryotes having slightly larger numbers due to …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… Over 40 percent of the cereal crop’s genes respond to drought stress. The Science … common images in many regions due to more extreme weather events such as heat waves, droughts and floods. The … and the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Community‐Level Metabolic Shifts Following Land Use Change in the Amazon Rainforest Identified by a Supervised Machine Leaning Approach
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Mapping Heat Resistance in Yeasts
… A new approach for improving functional annotation in fungal … Genomics Project led by the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility of Lawrence … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of …
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New and Improved: Eucalyptus Reference is Now Accessible
… compared to the 2014 Eucalyptus grandis reference genome that has been widely adopted. The new genome assembly resolves … The new improved genome assembly generated through the JGI’s Community Science Program will help support targeted … genome assembly and annotation. Genome contiguity of the 2025 phased reference and 2014 diploid genome reference was …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… Every year, the JGI sequences around 35,000 samples — from plants, algae, bacteria, … the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are freezers with …
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You Can Move, But You Can’t Hide
… Researchers at the JGI develop a tool to quickly and accurately … and their evolution at the cellular level, scientists can better understand ecosystem-wide processes. Summary geNomad … Genome Institute (https://ror.org/04xm1d337), and the National Energy Research Scientific Computing Center (NERSC) …
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Doubling Down on Known Protein Families
… Using a novel computational approach, researchers confirm … diversity of microbes through a novel approach to better understand microbial communities by looking at … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Operating Expenses
… FY2025 Spending Profile The JGI is funded primarily by the DOE Office of Biological and Environmental Research (BER), a program within the …
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