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Four Researchers Join JGI User Executive Committee
… have been elected to the User Executive Committee of the Joint Genome Institute, a Department of Energy user facility … to study complex biological and environmental systems. The foundational studies enabled contribute to the development … development and initiation of the Genomic Encyclopedia of Bacteria and Archaea (GEBA) project. As a UEC member, he …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… Researchers from the JGI recognized for their “significant influence in their chosen field or fields through the … to reliably match viruses with their archaea and bacteria hosts.  Jeremy Schmutz’s 2023 published work … population genomics to investigate archaeal hitchhikers and found that, while they often act as parasites, others …
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Webinar: SIP technologies at EMSL and JGI
… Molecular Sciences Laboratory (EMSL) and the Joint Genome Institute (JGI) provide access to a variety of tools that … still try to target this density change equivalent to those found with >10% atom enrichment of 13C in your target … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… Igor Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, found that the fungus Olpidium is a link in the evolution … with various origins, ranging from fungi, plants to bacteria. Back in 2011 when these genome and transcriptome …
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Data Policy
… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It is our mission to support open data and … Embargo : A period in which data is not publicly available in JGI systems or outside repositories. Full access is …
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Leo Baumgart
… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, following his doctoral … to a wide range of JGI user science projects spanning bacteria, fungi, and plants. His team is also developing … BS in Biochemistry and Cell Biology, University of California, San Diego PhD in Molecular Biology, University of California, San Diego …
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SPRUCE-ing Up Science
… A former JGI intern is now applying his internship lessons on … Duke University, published their research related to how bacteria that colonize the roots of sphagnum work to … the carbon-sequestering abilities of peat moss. Peat is found in the temperate north, in U.S.-based places like …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… In honor of the JGI's 25th anniversary in 2022, we have … the cells of other organisms. As they infect microbes like bacteria, algae and protists, all kinds of viruses impact … be done” Roux said. And in just 6 years, IMG/VR has built a foundation for finding more of those details from all kinds …
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Nikos Kyrpides
… Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program and the … BA in Biology, Aristotle University of Thessaloniki, Greece PhD in Molecular Biology and Biotechnology, University of Crete, … Systems. Mol Cell . S1097-2765 Schulz F, et al. 2020. Giant virus diversity and host interactions through global …
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Honey Bee Gut Microbiota Divvy Up Dinner
… Scientists find bee gut microbes have a division of labor when it comes … yield sugar monomers, it’s only with the aid of specialized bacterial enzymes. Honey bees rely on their gut microbiota … honey bee and bumblebee gut microbiomes. Researchers found that pollen’s pectin and hemicellulose are degraded …
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Ancient Algae Reveal Secrets of Plant Evolution
… Research uncovers the genetic foundations that helped plants conquer land over 600 million years ago. The Science By studying the genes of land plants’ closest algal relative,  … with stress responses and compared them with those found in modern plants. They discovered that ancient algae …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… between fungal guilds, genes and function. If a tree falls in the forest — whether or not anyone registers the sound — … had to work outside of taxonomy. “And the way we found was to focus on comparison of expression levels … and metabolize nutrients. They sequenced all of the RNA found in soil samples, and assembled those RNA transcripts …
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