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… viruses is just the beginning. “I often say that just identifying a sequence as viral is not even half the story.” Neri … of efficient, automated approaches to analyze and classify sequence data at this scale is essential.”   …

… analysis pipelines.  Beyond profiling over 10k samples/year, Dr. Louie and her team work with other JGI scientists … to assess metabolite turnover, DNA-SIP for helping identify active micro-organisms within complex communities, and … genomic data (MAGI) for functional annotation and identifying unknown compounds (Pactolus). …

… a dark room with a flashlight, only able to clearly identify what falls within that single beam. When it comes to … but we knew the families,” Kyrpides said. Yet, “almost 20 years of metagenomic data and metagenomic analysis, and … of new protein families had started to plateau in recent years, perhaps suggesting that scientists had “captured” …

… Baldrian’s team was investigating. So, to be able to identify proteins, the team compiled DNA sequences (metagenomes) … referencing the database, Baldrian’s team was able to identify enzymes in the soil and who made them. Based on data …

… deep-sea hydrothermal vents – and computationally identifying which sequences represent viruses that were present in …

… of river health diagnostic systems to monitor for and identify land use or water quality changes. Summary Rivers are key …

… rapid environmental changes. Researchers were able to identify specific genes that allow the algae to adapt to sudden … more nutrients to fuel growth. The Impact Over the last 40 years, summer sea ice in the Arctic has decreased by more …

… Q:  To what extent is natural soil a limit to identify molecules exchanged between plants and microbiomes during … in the field. By having transcriptomics data across 2 years, as well as a second field trial (which will include a … to have enough replicates that would allow us to identify significant changes.  Q:  Any advice on metabolomics …