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W. Berkeley Kauffman
… Berkeley is responsible for receiving and processing user samples. His R&D work focuses on the development of new applications utilizing a variety of technologies to improve the JGI’s …
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Mike Sneddon
… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome Institute. His … pipelines that support JGI’s portals, tools, and the DOE’s emerging AI-enabled capabilities for science.  Dr. … , PCT application PCT/US2021/018050 (published 2021). Arkin, AP, et al. KBase: The United States Department of Energy …
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De novo DNA synthesis using polymerase-nucleotide conjugates
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Hiroshi Otani
… Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has … BS, Engineering, Tokyo Institute of Technology Master's, Biotechnology, University … Kunakom S, Otani H, Udwary DW, Doering DT, Mouncey NJ. Cytochromes P450 involved in bacterial …
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Neha Varghese
… Neha’s key role is to design, benchmark, and apply bioinformatics software to enable analysis and interpretation of genomic and metagenomic data for JGI’s … projects through implementation of advanced analysis pipelines and tools as well as development and implementation of …
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Extensive Genome-Wide Phylogenetic Discordance Is Due to Incomplete Lineage Sorting and Not Ongoing Introgression in a Rapidly Radiated Bryophyte Genus
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The Power of One, Amplified
… A preview of how large-scale single cell genomics complements metagenomics studies. The … University of Calgary and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence … by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported under …
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New Research Sheds Light on Diversity in the Deep Sea
… Microbial communities living near hydrothermal deep-sea vents hold vast potential for …   The Science Hydrothermal vents are ocean-floor openings in the Earth’s crust that emit hot, mineral-rich water. … the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley …
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Green Algae Reveal One mRNA Encodes Many Proteins
… Gene expression in eukaryotes was long held to be monocistronic – that is, a … National Laboratory, the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Berkeley Lab … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship internship program between the DOE Joint Genome Institute (JGI) and University of … Ernie Costello beamed as he spoke of what the program does for UC Merced students. He described it as “life …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… Sequencing technology has changed dramatically over the last  25-plus years since the JGI’s inception, making it possible for researchers to get a close … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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Optimizing de novo genome assembly from PCR-amplified metagenomes
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