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Opening doors to physical sample tracking and attribution in Earth and environmental sciences
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Tracing the Evolution of Shiitake Mushrooms
… diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get their name from the same … Science Program (CSP) at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … US Department of Energy JGI (https://ror.org/04xm1d337), a DOE Office of Science User Facility, was supported by the …
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The Expanding Universe of Methane Metabolisms in Archaea
… database maintained by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, for publicly available metagenome … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility located at Lawrence …
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iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in what cultivation can’t. The Science At first, viruses are merely toolkits. To do … at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley …
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Secreted Effector Proteins of the Poplar Leaf Spot and Stem Canker Pathogen Sphaerulina musiva Manipulate Plant Immunity and Contribute to Virulence in Diverse Ways.
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Whole Community Metatranscriptomes and Lipidomes Reveal Diverse Responses Among Antarctic Phytoplankton to Changing Ice Conditions
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Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species
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Jeremy Schmutz
… Mr. Schmutz’s involvement with the JGI dates back to 1997, when he was working for the Stanford … directed finishing and co-led the team that finished the DOE human chromosomes 5, 16, and 19. Following the … Program, focusing on the organization of community driven science for JGI Plant Flagship Genomes and DOE relevant …
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ALE: a generic assembly likelihood evaluation framework for assessing the accuracy of genome and metagenome assemblies
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BIGMAC : breaking inaccurate genomes and merging assembled contigs for long read metagenomic assembly
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The INSIG2 rs7566605 genetic variant does not play a major role in obesity in a sample of 24,722 individuals from four cohorts
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Enrichment of root-associated Streptomyces strains in response to drought is driven by diverse functional traits and does not predict beneficial effects on plant growth
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