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Aspergillus was pretty good, but, you know, just from a data standpoint, just figuring out introns and dealing with, … of Energy Joint Genome Institute, a DOE Office of Science User Facility located at Lawrence Berkeley National Lab. You … air, email us at [email protected] .    And because we’re a User Facility, if you’re interested in partnering with us, …

… flows, and evolved into scalable methods for scientific data analysis. In 2014 Dr. Fagnan became the JGI-NERSC … hardware and worked closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was … Data Collaborative where she leads infrastructure and user-centered design efforts. … PhD Applied Mathematics …

… related to such aquatic species as diatoms and kelp. Dubbed Phytopthora ramorum (pronounced: Fy-TOFF-thor-uh … in their neighborhoods and nearby forests with the right tools to track infection. The parallel development of the … large-scale “citizen science” project to generate real-time data for modeling and predicting the spread of a plant …

… of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley National Laboratory, … used 1,870 known virus-host pairs to generate a matrix of data points.  Applied to 216,015 high-quality virus sequences in the IMG/VR database, the iPHoP program generated many new …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … find genetic regions of interest.” The combination of field data and genetic information has allowed the research team … puzzle with just 50 pieces. The combination of new genetic tools and experimental gardens allow researchers to detect …

… and position JGI as a leading integrative genome science user facility. In addition to serving as JGI Director, Dr. … is also on the Leadership Team of the National Microbiome Data Collaborative and served as President of the Society … of solvent-producing Clostridium species. Scientific Data. 11 Hahnke, R. L. et al. 2022. Expanding the Genomic …

By mining more than 14,000 publicly available metagenomic datasets in JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) data suite—which includes  IMG/VR (for Virus)—for the … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …

… and combining the information with previously published datasets. The work was  recently published in the journal  … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … “This represents the largest integration of single-cell datasets in plants and provides a foundation for still …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported under Contract No. …

…   This highly hands-on workshop is designed to familiarize users with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows for computational analysis and interpretation of sequence data. IMG/M is a web-based platform that provides access to …

Metagenomic datasets could help map out microbial diversity hotspots … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … biodiversity. Using publicly available genome sequence data generated over the past three decades, their study …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility. Grigoriev and his team at the JGI contributed … partners. Yet the team found none. Instead, the partners stubbornly maintained complete autonomy; they can be isolated … variation in its progeny. The study’s transcriptomic data also identified many genes potentially important for …