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Natural Prodcast Episode 2: The Primer, Part 2
… has been really crucial.  DAN: Yeah, yeah. The more data you generate, the more knowledge you can generate. So …
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iPHoP: A Matchmaker for Phages and their Hosts
… used 1,870 known virus-host pairs to generate a matrix of data points.  Applied to 216,015 high-quality virus sequences in the IMG/VR database, the iPHoP program generated many new … host microbes play in nutrient cycles. … This work was supported by the U.S. Department of Energy, Office of …
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Marcel Huntemann
… metagenomes. He also works on automating intra-department data exchange and assists with large scale computations on …
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New Research Sheds Light on Diversity in the Deep Sea
… too deep in the sea to get any sunlight, and yet they still support a unique array of microorganisms adapted to living … and metabolic potential of the communities studied. The datasets are available on the JGI’s  Integrated Microbial …
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User Advisory Committees
… effective management and strategic objectives for the JGI’s data science, informatics and information technology (IT) …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… such as individual genes, whole pathways, genome-editing tools, and reporters.” JGI-developed genetic engineering …
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DOE JGI Interns Share Their Summer Experiences
Many of them spent the summer crunching genomic data at a computer; a few had the opportunity to spend time … funded by the National Science Foundation (NSF) and supports underrepresented minorities in science, technology, … Ali, who worked with T.B.K. Reddy on the Genomes OnLine Database; Sarah Fruchart , who worked with Matt Blow; Sean …
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Tanja Woyke Elected to American Academy of Microbiology
… is most fortunate to have scientists of Dr. Woyke’s caliber support the JGI User community in accessing our resources …
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Introducing New Members of the JGI User Executive Committee
… in giving a voice to JGI users who feel that certain data sharing policies fail to represent the needs of large … unaware that [public but use-restricted] exist on [the JGI data portal] IMG or how to deal with situations in which they inadvertently analyzed use-restricted data without contacting the lab that generated that data,” …
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NeLLi — Symposium on New Lineages of Life
… of Symposium Goals Metagenomic and single-cell sequence data have provided a means to access novel microbial … approaches to assign functional “read out” to sequence data. Moving from cataloging microbial diversity to …
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Crawling through time: Transition of snails to slugs dating back to the Paleozoic, based on mitochondrial phylogenomics
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Discovery and ecogenomic context of a global Caldiserica-related phylum active in thawing permafrost, Candidatus Cryosericota phylum nov., Ca. Cryosericia class nov., Ca. Cryosericales ord. nov., Ca. Cryosericaceae fam. nov., comprising the four species
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