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IMG 4 version of the integrated microbial genomes comparative analysis system
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IMG: the integrated microbial genomes database and comparative analysis system
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Making a Lichen Together
… could help inform efforts at bioengineering symbiotic microbial consortia for bioenergy crops. And because lichens … the fungus and alga, either separately or together, on nitrocellulose filters in Petri dishes. The scientists also … in the lichen lifestyle. The team’s results appear in  BMC Genomics . To explore the genomes, Armaleo and colleagues …
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The JGI announces 2024 awardees for our Community Science Program annual call
… calls including our New Investigator and Functional Genomics calls, here on our website . See below for the full …
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Axel Visel
… for large-scale in situ gene expression analysis in multicellular organisms. During his postdoctoral training at … Heart Association, Medical Research Council (UK),  Nature, Cell , Nature Genetics , Nature Methods ,  Genome Research … tolerant CAM plants, Agave deserti and Agave tequilana. BMC Genomics  14, 563. May D, Blow MJ, Kaplan T, McCulley DJ, …
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A One-Stop Shop for Analyzing Algal Genomes
… sequence and understand. A team of researchers led by Algal Genomics Program lead Igor Grigoriev and data scientist Alan … tools created by JGI researchers, including the Integrated Microbial Genomes and Microbiomes (IMG/M) system for microbial and metagenome datasets, MycoCosm for comparative …
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Genomic Encyclopedia of Type Strains, Phase I: The one thousand microbial genomes (KMG-I) project
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… fungal metatranscriptome yet,” said Igor Grigoriev, Fungal Genomics Program Head at the JGI.  Along with an improved … functions across different forests. Primary metabolism, cell activity, and fungal development looked quite alike for … that both guilds express similar genes for degrading fungal cell walls, the so-called fungal necromass, suggesting these …
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JGI Accepts 17 Proposals for Community Science Program
… intent submitted. Many of the proposals focus on harnessing genomics to developing sustainable resources for biofuels … State University and colleagues are interested in the microbial communities that live on Alaska’s glacially … tree species that are widely grown as feedstocks for lignocellulosic and other biorefinery products. The work builds …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… in large data sets, their work may be akin to finding a single snowflake on a colored-in page of that book. Published online September 28, 2022, in Cell , a team led by researchers at Tel Aviv University in … metatranscriptome datasets from the JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) system. “We then …
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JGI announces 2024 Functional Genomics awardees
… the JGI accepts proposals for state-of-the-art functional genomics research from reseachers who translate genomic … into biological function. Through our CSP Functional Genomics call , we look for projects that will leverage the …
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Building Sphagnum Genomic Resources
… and climate is estimated to be larger than any other single plant genus. Peatlands accumulate partially … unparalleled model system for ecological and evolutionary genomics .” Understanding the nature and genetic basis of …
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