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Emily St. John, Gilberto Flores, and Peter Girguis about sampling these communities, and understanding how …

… analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple … she said. Listen to study co-author Dan Udwary talk about genome mining using the GEM catalog in  this episode … of which had not already been associated with a host – with 23,000 MAGs. Modeling A New Path for Metagenomics …

… boggy wetlands produces an estimated 5% of annual greenhouse gas emissions. Understanding how sphagnum, a primary … filtering water. Peat formed there over thousands of years sequesters more carbon than all other vegetation types in … Facility, is supported under contract no. DE-AC02-05CH11231. …

… capabilities support researchers exploring how to convert sequence into functional assessments. This is done by … The team has three subgroups: Synthetic Biology Lab : a user science group dedicated to user project design, … assembly and analysis Overview of synthesis products The JGI DNA Synthesis platform enables users to validate …

Recent study shows eelgrass has been around about 2.5 million years less than previously believed.  The Science Eelgrass, one of the most … its history. Their research, published in  August 2023 in  Nature Plants , was able to assess absolute time …

… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … assesses what fraction of the microbial diversity we know about, and proposes a path forward to curate and cultivate …

… snails, UC Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first sampled the … Nuevo is, historically, a fishing town and we know little about its coastal microbial ecology. We also know little …

Every year, the JGI sequences around 35,000 samples — from plants, algae, bacteria, archaea, fungi, viruses — to support scientists around the world. Most of those … send their samples in from afar, without ever hearing much about the sequencing lab. So today, Chris Daum walks through …

… walls, while brown rot cannot break down the lignin but use cellulose. Finally, there are soil saprotrophs, which … in moving toward functional genomics studies to learn more about the inner workings of plant-host and … U.S. Department of Energy under Contract No. DE-AC02-05CH11231 within the framework of the Mycorrhizal Genomics …

Grimwood is also co-director of the HudsonAlpha Genome Sequencing Center. Grimwood heads the Library Construction group for the JGI Plant Program . Her collaborations with the JGI began … reference sequence of the complex switchgrass genome , using samples from common gardens growing across the …

… crop yields.  The Science The fire moss Ceratodon purpureus is a short plant with a complex genome . Now, … Carey, now at the HudsonAlpha Institute for Biotechnology, reported that high quality genome references are now … HudsonAlpha. As the team discussed in a JGI podcast episode about the work, the effort to fully sequence the fire moss …