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The Genomes On Line Database (GOLD) in 2007: status of genomic and metagenomic projects and their associated metadata
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Trent Northen
… leadership roles within large DOE-funded research programs using mass spectrometry for energy and environmental … Joint BioEnergy Institute and the ENIGMA SFA project. In 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… well as the evolution of seed plants, the fern’s distant cousin. Ceratopteris richardii, or C-fern, specifically has … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … of plant-based biofuels and bioproducts. ( Learn more about OGG in  this episode of to the JGI podcast Genome …
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A Step Toward Controlling Soybean Rust
… is the world’s leading soybean producer , and soybeans are used to produce biodiesel. The fungus  Phakopsora pachyrhizi … as 90 percent. As part of the DOE Joint Genome Institute’s  2016 Community Science Program portfolio , Sebastien … to counter soybean rust disease. Soybean itself is a  JGI Flagship plant genome , and JGI  published its genome …
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Expanding Virophage Diversity
… Virophages are small viruses with double-stranded DNA genomes that co-infect … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science facility, have increased the … the gene counts have similarly gone up from 13-25 to 12-39. “Overall,” the team concluded, “we provide a …
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Complete genome sequence of Vulcanisaeta distributa type strain (IC-017T)
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Forming Scientific Connections and Building Community
… The 11th cohort of JGI-UC Merced interns pick highlights from their summer … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, hosted three undergraduates and seven … Watch the short video here to see what they had to say about their experiences and what they’ll take with them as …
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Understanding Wildfire Recovery, Starting in Soil
… forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, paving the way … from a wildfire that burned at the Colorado-Wyoming border, about a year after the fire. They sampled soil across a … and growth.  This study builds on the pyrophilous fungi the JGI has previously sequenced , and provides a powerful …
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Genome sequence of the Trifolium rueppellianum - nodulating Rhizobium leguminosarum bv. trifolii strain WSM2012
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Tanja Woyke Elected to American Academy of Microbiology
… Congratulations to the JGI’s Tanja Woyke , who has been elected to the American … Scientific Achievement , and was among the Lab’s 2015 Women @ the Lab honorees. Woyke’s research focuses on developing and harnessing single-cell methods to …
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Open Frameworks Training the Next Generation of Scientists
… participants. Over the past two years, Myco-Ed has been used in 15 individual classrooms across the country, … Aligning with this overarching goal, Myco-Ed is a partnership involving academic faculty and researchers at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility, and the DOE …
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First Monoploid Reference Sequence of Sugarcane
… difficult to sequence and assemble, in turn limiting the use of modern, genomic breeding in these crops. For diploid … polyploid sugarcane genome now underway as part of the JGI Community Science Program (CSP), a critical factor in … in sorghum. Based in part on these positive results, in 2017, JGI approved a CSP proposal from the international …
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