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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… established and emerging scientists from academia, industry, and government organizations for three days of scientific presentation, … center talk and a tech talk. Stop by the JGI booth to learn about our user programs and how we can help advance your …
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Complete genome sequence of Halomicrobium mukohataei type strain (arg-2T)
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Olpidium, The Key to the Origin of Terrestrial Fungi
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, found that the fungus Olpidium is a link in the evolution and transition of … associated virus LBVaV; genus Varicosavirus ) which may severely reduce crop yields. Like the typical chytrids …
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How Filamentous Fungi Sense Food
… Tracing gene regulatory networks in the model fungus  Neurospora crassa . The Science A team led by … degrade the plant biomass. In order to learn more about these regulatory networks in the model fungus  N. … and Development Program of Berkeley Lab, among other organizations. …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… the summer of 2014 has grown to a total of 75 with the inclusion of the 2023 cohort. Each of them has brought … have a number of initiatives across several different campuses with this being our largest and most successful one. … changed what I want to do with my life,” “I can code.”  Jorge Arroyo , director of UC Merced’s Undergraduate Research …
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Understanding Wildfire Recovery, Starting in Soil
… forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, paving the way … from a wildfire that burned at the Colorado-Wyoming border, about a year after the fire. They sampled soil across a … and fungi identified in this study was the ability of these organisms to degrade aromatic compounds from burned …
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JGI User Executive Committee Expands
… Six new members have been elected to the User Executive Committee (UEC) of the U.S. Department of … challenges. She’s worked with the JGI on poplar and sorghum projects, specifically for generating libraries of … JGI offers, as well as proposal review procedures and the organization of the JGI Annual Meeting. Any investigator who …
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SPRUCE-ing Up Science
… elevated temperatures that normally would kill the moss may hold clues to how these carbon sink environments can … of biology and computer science, to reveal clues about how microbial and bacteria communities influence the … on his PhD program at UC Merced in 2013, this field was just beginning to develop and expand into the world of …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… alga into a powerful platform for developing ​​bio-based industrial products.    The Science Scientists have fully … for producing specialty oils, chemical feedstocks and industrial precursors — as well as to better enable the mining … modifications usually insert randomly in other algae, this organism lets scientists place new genes precisely where …
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Taking Stock of the Known and Unknown Microbial Space
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … assesses what fraction of the microbial diversity we know about, and proposes a path forward to curate and cultivate … bacterial diversity. The team conservatively estimated that about 42% of the bacterial diversity has no genomic …
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Doubling Down on Known Protein Families
… Using a novel computational approach, researchers confirm … genes from isolates, there isn’t much scientists can tell about its function or its origin. As a result, these genes … is working on soil environments or the human body — they may take some of those families and try to functionally …
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Soybean (Glycine max) Haplotype Map (GmHapMap): a universal resource for soybean translational and functional genomics
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