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Frederik Schulz
… leading the New Lineages of Life Group. His research is focussed on the discovery of novel bacterial, archaeal and … and biogeochemical cycles. He provides his expertise to the JGI user community and supports various user projects in the … 9 (1), 1-9 Roux et al. (2018) Minimum Information about an Uncultivated Virus Genome (MIUViG). Nature …
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Fungus Fuels Tree Growth
… a potential biofuel feedstock.     The Science The fungus  Mortierella elongata enjoys a dual lifestyle; it can … were striking. Adding PM193 caused poplar cuttings to grow about 30 percent larger by dry weight than without PM193  . … and National Science Foundation (concept ID 10.13039/100000001; grant number DEB 1737898). …
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MycoCosm portal: gearing up for 1000 fungal genomes
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Adaptation strategies of giant viruses to low-temperature marine ecosystems
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VEGA Symposium
Hosted by the JGI and co-organized with NIST,  the goal of the Viral … together a “Viral EcoGenomics” community to foster discussion on how to best capture and characterize uncultivated viruses, understand the role of viruses in natural ecosystems, …
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Jeremy Schmutz
… years, Mr. Schmutz has directed the JGI Plant Program, focusing on the organization of community driven science for … Plant Science Program Head at the JGI. Click to learn more about the program's areas of focus, major initiatives and … genome architecture of sugarcane. Nature 628, 804–810. Sreedasyam, A., Plott, C., MdS Hossain, J. T., Lovell, …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… and what escapes to the atmosphere in the form of greenhouse gases (e.g., carbon dioxide, methane, and nitrous … reference fungal genome sequences assembled as part of its 1000 Fungal Genomes Project . To map microbial activity, … than expected. The transcriptome data had suggested about a 50/50 split between fungal and bacterial enzymes. …
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Glacier ice archives nearly 15,000-year-old microbes and phages
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Building Sphagnum Genomic Resources
… resources to build up Sphagnum as a plant model system focused on carbon cycling studies, rather than for food or fuel … decomposed matter, and researchers estimate that they hold about 25 percent of the world’s soil carbon. In high … Grant No 660280), and the VILLUM FONDEN (research grant 15510). … Sphagnum fallax on Phytozome … Datasets …
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Gotta Catch 'Em Gall
… called galls.  In this episode, hear from Kasey and Patrick about how this project unfolded, and how they worked with the JGI's metabolomics program to find out more about these weird little pods. …
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The More the Merrier: Making the Case for Plant Pan-genomes
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … more than once, and these events took place a million years apart: the individual with a maternal  B. distachyon …
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Doubling Down on Known Protein Families
Using a novel computational approach, researchers confirm … genes from isolates, there isn’t much scientists can tell about its function or its origin. As a result, these genes … families. From there they focused on families with at least 100 members.  “If you have 100 sequences, the quality of the …
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