Results

2024 Progress Report
… (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area are also co-located in the IGB. Vision  Lead …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… genetic toolkit of ancestral and present-day plants The Science In a recent  Nature Genetics paper , researchers … Commonly known as liverwort, this was done to gain insights into gene families involved in adaptations seen in later … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Next generation sequencing and bioinformatic bottlenecks: the current state of metagenomic data analysis
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Gene Context Analysis in the Integrated Microbial Genomes (IMG) Data Management System
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Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data
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SoyCSN: Soybean context‐specific network analysis and prediction based on tissue‐specific transcriptome data
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The Physcomitrella patens gene atlas project: large‐scale RNA‐seq based expression data
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Genome Data Provides High Support for Generic Boundaries in Burkholderia Sensu Lato
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Exploiting proteomic data for genome annotation and gene model validation in Aspergillus niger
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Statistical analysis of feature-based molecular networking results from non-targeted metabolomics data
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The IMG/M data management and analysis system v.7: content updates and new features.
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
The JGI Engagement Webinar held November 5, 2020 (watch the  … analysis capability available through the  Community Science Program (CSP) . This includes mass … data (secondary metabolomics), how can we map it into these networks? A: We use networks based on the …
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