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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
Register here Book your stay at the conference venue This inaugural event will bring … and disciplines who are developing and applying laboratory ecosystems to help transition microbiome science from … ecosystems across various biological contexts. The program fosters intimate, dynamic interactions, offering an …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… down tough plant fibers. The Science Walk in a temperate forest filled with Norway spruce trees, and microbial … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Integrating Collaborations for User Science (FICUS; #49499) program and used resources at the DOE Joint Genome Institute …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
Every year, the JGI sequences around 35,000 samples — from plants, algae, … the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are freezers with …
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Micro-Scale Applications Group
The Micro-Scale Applications group explores the genetic makeup of natural … information with individual cells. Research Team    … The JGI uniquely offers the first quantitative Stable Isotope … such as, “who is eating what?” and “who is active? … The JGI provides users access to cutting-edge cell sorting, DNA …
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The widespread IS200/605 transposon family encodes diverse programmable RNA-guided endonucleases
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David Goodstein
With a background in experimental and computational surface physics, Dr. Goodstein held positions at … equipment manufacturer KLA-Tencor before joining the JGI in 2002. Initially focused on building tools to … expert curation of human gene models in support of JGI’s contributions to the Human Genome Project, he began …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… reveals the microbial community involved in a bioremediation effort. The Science In 1999, the Environmental … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … biodegrading PCE.  Through the JGI’s  Community Science Program , they were able to analyze the resulting …
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Eelgrass Proves to Be Much Younger Than We Thought
… one of the most abundant plants in the ocean, originated in Japan before spreading around the globe. Now, … its history. Their research, published in  August 2023 in  Nature Plants , was able to assess absolute time estimates … of Energy Joint Genome Institute Community Sequencing Program (CSP 502951, 2016, Population and evolutionary …
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The More the Merrier: Making the Case for Plant Pan-genomes
… merrier,” with respect to their genomes. In their base state, they are diploids with two genome copies, one from each … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the study, partly enabled by the JGI’s  Community Science Program , the team generated reference genomes for  B. …
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A programmable droplet-based microfluidic device applied to multiparameter analysis of single microbes and microbial communities
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Dealing with Drought: Uncovering Sorghum’s Secrets
… common images in many regions due to more extreme weather events such as heat waves, droughts and floods. The … and the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Berkeley Fellowship and NSF Graduate Research Fellowship Program Grant DGE 1752814. K.K.N. is an investigator of the …
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Improved-high-quality draft genome sequence of Rhodococcus sp. JG-3, a eurypsychrophilic Actinobacteria from Antarctic Dry Valley permafrost
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