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Webinar: Introducing the BioSANS capability
Scattering (BioSANS) instrument when applying to the FY2022 EMSL-JGI FICUS call for proposals. Presentations from: … high-throughput sequencing and computational analysis that enable systems-based scientific approaches to these …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… (KBase) , a free, open source data science platform that allows users to explore data and share reproducible … including hot springs and acid mining sites, traits that might have biotechnological applications.   Among the … three groups: cyanophages, bacteriophages, and giant algal viruses.  The approved proposals started October 1, 2020 and …
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MGM Workshop at Fisabio Summer School 2025
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New Research Sheds Light on Diversity in the Deep Sea
… vents are ocean-floor openings in the Earth’s crust that emit hot, mineral-rich water. These vents are too deep … function in such extreme conditions. They identified 511 new or recently discovered genera of bacteria and … Science Foundation grants OCE-0728391, OCE-0937404, OCE-1558795 to A-L.R, and OCE-2049478 and DBI-2047598 to K.A. We …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
With a new methodology, scientists are now getting more complete genomic results from single cells. The … Multiple Displacement Amplification, and most genomes that were acquired through it were usually only around 30% … of Science of the U.S. Department of Energy [DE-AC02-05CH11231]. Dr. Charles Gawad has been supported for this work …
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Fungus Fuels Tree Growth
… sequenced and annotated for this study. The team found that, unlike pathogenic or mycorrhizal fungi (mutualist … States Department of Energy under contract DE-AC02-05CH11231. Support was also provided by the NSF Zygolife (NSF-DEB1441715), the United States National Science Foundation (NSF) …
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What Happens To a Rainforest When You Dial Up Drought?
… on Earth, and soil microbes play a key role in pulling that carbon out of the atmosphere. This episode, researchers take a look at what happens to that storage when a rainforest hits a drought. Tag along …
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Boosting Small Molecule Production in Super “Soup”
… such as proteins, and the mechanisms for maintenance to keep processes running smoothly. As reported August 26, … of Northwestern University describe a two-pronged approach that starts with engineered yeast cells but then moves out … bio-design and identifying the best sets of enzymes that enable synthesis of sustainable chemical products,” …
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The Power of One, Amplified
… low diversity hot spring sediment sample. Their work showed that single cell genomics can add significant value to the … and metagenomic sequencing. For example, they showed that the composition of the community was similar across … User Facility, is supported under Contract No. DE-AC02-05CH11231. This work was supported in part by a Natural Sciences …
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DOE JGI Interns Share Their Summer Experiences
… briefly about their time at the JGI at http://bit.ly/JGI15summerinternsvids . Click here to check out photos of the …
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Tracing the Evolution of Shiitake Mushrooms
… white rot fungi, belonging to an elite group of decomposers that can break down all of wood’s components — cellulose, … atmospheric carbon dioxide.  Summary Researchers sequenced 11 samples from Asia–Australasia and 13 samples from the … Americas. Tracing these phylogenetic relationships suggests that the shiitake mushroom, Lentinula edodes, originated in …
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Training the Next Generation of Talent
… graduate students with individual projects at the DOE JGI that provide hands-on experience in cutting-edge genome … is a technique for profiling the small fraction of a genome that contains transcribed instructions for building and … lab, he also took a long view of the opportunity. “I’m getting a picture of the amount of data that’s going to be …
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