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Genome Insider
… to a more sustainable world. Learn about JGI-supported projects, delving into the researchers’ motivations, the …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … (metatranscriptomes) generated from diverse environmental samples around the world, resulting in a five-fold increase … viruses,” said Simon Roux , a JGI scientist and one of the project co-leads. “But same as DNA viruses, RNA viruses …
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Tanja Woyke Elected to American Academy of Microbiology
… the 68 new Fellows in the Class of 2020, selected from 118 nominees. The selection process for AAM Fellows is based … honor,” said Axel Visel , JGI Deputy for Science Programs. “It clearly speaks to the enormous impact her … to have scientists of Dr. Woyke’s caliber support the JGI User community in accessing our resources and help them to …
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Gene Expression: From On-Off Switch to Dial
… systems, expanding the technologies available for other JGI users outside the realm of bioenergy optimization. Summary … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Force Office of Scientific Research under Award No. FA9550-14-1-0089, the Camille and Henry Dreyfus Foundation, and the …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … keeps its DNA more organized. “The big surprise of the project was to realize that these genome copies that are … Antilles and a co-first author on the study, performed the 16S rRNA gene sequencing to identify and classify the …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… the biodegradation process, researchers collected microbial samples from wells at the site in 2007, 2009, and 2010. DNA … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … to analyze the resulting metagenomic data. (Data from the project are available on the  JGI Genome Portal .) The team …
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Marine Microbe Contains Multitudes
Hawaii Ocean Time-series (HOT), they collected samples of the ocean’s microbial communities periodically at … Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … out that, without the JGI, the discoveries made in this project wouldn’t have been possible. Scientists hadn’t known …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… for Studies in Bacterial Systematics for the triennium 2017-2020! Established by the University of Queensland in … Lab), Woyke currently serves as the interim deputy for JGI User Programs. Earlier this year, she was elected to the American …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… ecosystems. Viruses rarely grow well in environmental samples brought back to a lab, because they often need … to replicate. Sequencing genetic material directly from samples sidesteps these challenges, since it doesn’t require … to boost understanding of environmental viruses. In 2016, Nikos Kyrpides at the JGI led a team that combed …
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Pinning Down a Piece of Photosynthesis
… an array of experiments at universities and national user facilities, researchers found that this protein detects … — but the experts we were able to work with on this project to ask questions about structure and function,” … longtime JGI collaborator Sabeeha Merchant’s group. In 2011, they inventoried a swath of blueprints to find parts …
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PMR5, an acetylation protein at the intersection of pectin biosynthesis and defense against fungal pathogens
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… environment of comparable salinity.  Researchers collected samples at several points in time to assess nutrient … dead cells recorded. Samples were taken again at two, six, 12 and 24 hours. By the 24-hour mark, these algae showed … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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