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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… or through the  “Facilities Integrating Collaborations for User Science” (FICUS) initiative .  Q: What is the … proposal for the technical feasibility first. Prospective users are always welcome to contact one of us about possible … of the proposals. Upon approval from JGI reviewers, the DOE project managers review the proposals. The proposer of …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… messenger RNA sequences (transcriptomes) from their soil samples. This gene expression dataset was particularly … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … sequences assembled as part of its 1000 Fungal Genomes Project . To map microbial activity, Baldrian’s team …
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A Model System for Perennial Grasses
… The U.S. Department of Energy (DOE) supports research programs for developing methods for converting plant biomass … DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility, report the culmination of nearly a decade of … of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the …
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Label-free structural imaging of plant roots and microbes using third-harmonic generation microscopy
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Microbes with Metagenomics  By leveraging metagenomics to sample the entirety of a microbial community out in its … as through the Facilities Integrating Collaborations for User Science Program (FICUS) with the Environmental …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… at the DOE Joint Genome Institute, a DOE Office of Science user facility located at Lawrence Berkeley National … Laboratory, have collaborated with global researchers on projects related to understanding how the interactions … from thousands of ecologically diverse metagenomics samples. The work is supported by NIH Common Fund grant …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley National Laboratory, has … (https://ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the Office of Science of the … was done under Contract DE-AC52-07NA2734. Funding for this project was provided by the U.S. National Science Foundation …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… cost and resource requirements of processing these sturdy materials, rumen microbes and their enzymes are an optimal … and then extrapolating data obtained from environmental samples — to identify over 27,000 microbial genes. These … into genes and even into genomes — from these environmental samples,” said Matthias Hess, first author on the paper and …
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JGI-KBase Panel at SACNAS
… through the Department of Energy-funded National Labs, User Facilities and Programs, and introduce best practices for anyone to get … program managers, and intern alumni will introduce projects designed for students to gain research experience …
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An Earth Month Look at Sustainability Efforts at the JGI
… said. These emissions come from the whole lifecycle of materials used — from their creation to their disposal.  To … the JGI committed to using Stirling freezers to store samples, which use less than half as much energy as other … now IGB-wide ZERO Waste Initiative began its most ambitious project yet: a special recycling program to recycle lab …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … of Bacteria and Archaea (GEBA) initiative. “This project has helped to define the current shape of the … genomes (MAGs) reconstructed from sequenced environmental samples in a previous study. The team analyzed over 80,000 …
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Better Genome Editing for Bioenergy
… at a genetic level, how does  Y. lipolytica work? The project was a multi-institutional effort led by … Joint Genome Institute (JGI), a DOE Office of Science User Facility. Y. lipolytica is a tantalizing microbial … four genes, including one with no prior known function. The project’s success demonstrates how to sharpen the …
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