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… fields over the last decade, demonstrated by the production of multiple highly-cited papers that rank in the top 1% by … to help researchers assess and improve the quality of metagenome-assembled viral genomes. The paper appeared in  … from breeding programs of related candidate bioenergy feedstock crops such as sugarcane and sorghum.     …

… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … and the  DOE Systems Biology Knowledgebase (KBase) . Metagenomics is the study of the microbial communities in the … sequencing and analysis. “Using a technique called metagenome binning, we were able to reconstruct thousands of …

… their work delivered during the 5th anniversary celebration of the internship program. Candace Cole, UC Merced JGI Mentors : Ben Cole & Axel Visel, Genomics of Plant-Microbial Interactions “The summer internship has … about the big stuff, well, the little stuff! People hold office hours and you can pop in and ask them questions about …

… which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led … out to characterize the transcriptome – the complete set of RNA molecules transcribed from all the genes within a … are JGI Flagship Plants, mostly related to biofuels and feedstocks. And then we expanded that to include six more …

… Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex … Honey bees are invaluable pollinators — cupids of the plant world facilitating the remixing of genes in the … including collecting and analyzing the honey bee gut metagenome, which was done with the help of the US Department …

… UC Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first … 2016.  She described the microbial diversity patterns of Puerto Nuevo’s coastal waters and sediment with … more advanced in my understandings than I would be at this stage without the internship and mentorship that followed. I …

… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is committed to advancing the field of genomics through open access to resources and promoting … closing April 21st, 2021, to solicit additional community feedback on proposed changes to current data policies for …

… and relevance to the DOE’s mission.  Have someone proofread your proposal to make sure the goals, experimental … plan for data utilization are clear. Contact JGI staff for feedback before submitting a proposal. Describe in detail … can show reviewers the team is really able to take advantage of the data and work with the data. Q: How would you …

… from the other JGI Portals, as well. “For thousands of scientists around the world, the JGI Genome Portal is a critical resource — it provides access to all of JGI’s genomic databases and tools,” noted  Kjiersten … Google Analytics data, the team noticed that a large percentage of Phytozome users who were seeking to download all the …

… JGI is in the process of shifting its operations from Walnut Creek to the heart of … unneeded chemicals, unopened lab consumables, unneeded Lab tagged equipment, recyclables, and general waste that would … filled nearly 24 speedpaks, and more than half of them were tagged for waste streams other than the landfill. Naca added …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a … Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. … Along with highlighting the viruses in a given sample, metagenomics shed light on another key aspect of viruses in …

… . The Science Most species are diploids and have two sets of chromosomes, one from each parent. In contrast, many crops have multiple sets of chromosomes (they are “polyploid”) and their complex … factor in developing sugarcane as a sustainable bioenergy feedstocks. Summary Sugarcane is a cultivated crop that very …