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… On February 17, 2021, JGI and the Environmental Molecular Sciences Laboratory … range from traditional single cell sequencing and mini-metagenomics to more targeted approaches, such as BioOrthogonal Non-Canonical Amino acid Tagging (BONCAT). Q:  Do you offer scholarships and/or …

… In late June, Kathleen Lail, a member of JGI’s Sample Management Group, attended a conference in … email request reached  Emiley Eloe-Fadrosh , the Metagenome Program Head at the  U.S. Department of Energy … class decided to do an environmental microbial community (metagenomic) soil study in an untouched region of the …

… JGI researchers lend expertise to develop tools and data hub … CheckV , which assesses the quality and completeness of metagenome-assembled viral genomes ( Nature Biotechnology , … learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria ( PLoS Biol …

… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … on single-cell and spatial transcriptomics technologies. JGI Science Programs Deputy Axel Visel provided a broader … perspective:  “ This exciting work is well aligned with the JGI’s growing efforts in establishing plant and fungal …

… with the Department of Energy (DOE) Joint Genome Institute (JGI)’s Fungal and Algal Science Program and JGI users have been at the forefront of tackling this … toward 10,000 annotated genomes, this infrastructure advantage becomes even more critical. With roughly half of all …

… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Berkeley National Laboratory (Berkeley Lab) through the JGI Community Science Program (CSP) .  Through this … latitudes from pole to pole, using metatranscriptome and metagenome data from the JGI. With multiple threads of …

… One Health Ruhr (OHR), and the DOE Joint Genome Institute (JGI), Molecular Biophysics and Integrated Bioimaging (MBIB) … user facilities at Berkeley Lab. Commenting on the visit, JGI Director Nigel Mouncey expressed enthusiasm about the … user facilities located at Berkeley Lab, including the JGI, the National Energy Research Scientific Computing …

… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … store their genetic information in RNA without a DNA stage. “I would argue RNA viruses globally are even less known than DNA viruses,” said Simon Roux , a JGI scientist and one of the project co-leads. “But same as …

… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … mapping these RNA reads. “Currently, this is the largest JGI-sequenced fungal metatranscriptome yet,” said Igor Grigoriev, Fungal Genomics Program Head at the JGI.  Along with an improved understanding of multiple …

… Trained on environmental data, a new JGI tool more accurately facilitates microbial genome … the genome as if it were a language, then we can take advantage of existing methodologies developed for natural … efficiency of its modeling in the early testing stages. By aiding the understanding of patterns in large …

… This webinar focused on how the JGI employs single-molecule, long-read DNA sequences to aid … applied to DNA methylation analysis as well as improving metagenome assemblies. Q&A from the Webinar: Input & … weight DNA) is an important factor as well for PacBio metagenomes. Q: How many PacBio metagenomes can I submit?  How …

… systems, expanding the technologies available for other JGI users outside the realm of bioenergy optimization. … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … results show that this singular library synthesized by JGI was versatile enough for use in multiple applications. …