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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple applications … Ivanova, senior author of the study and head of the JGI’s Microbiome Annotation Group. Many of these bacterial and … collapsed, while these issues are not commonly seen with reference isolates. “For secondary metabolite discovery in …
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Marine Microbe Contains Multitudes
… many varied environments? Now, a recent study published in Microbiome has uncovered that SAR324 encompasses four … help regulate the global carbon cycle — fixing, transforming, and respiring carbon. Understanding the metabolisms … of single cells of the uncultivated SAR324. The constellation of data gave the team unprecedented resolution to …
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Ray Turner Completes Last Tour of Lab Duty at JGI
For the last 15 years, Ray Turner has been one constant for the Joint Genome Institute. On July 1, 2020, that all … retired Naval Commander retires from Berkeley Lab. For the last 15 years, Ray Turner has been one constant for …
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A Grass Model to Help Improve Giant Miscanthus
… into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass Miscanthus sinensis has been … for support from the Chan-Zuckerberg BioHub and the Marthella Foskett Brown family. … Miscanthus sinensis genome … …
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Digging into Microbial Ecosystems Deep Underground
… -Mike Wilkins, Colorado State University GI users and microbiome researchers Mike Wilkins and his graduate student … about the microbial communities deep underground, and before the pandemic, they took the JGI on a sampling field … initiative called Facilities Integrating Collaborations for User Science (FICUS) . Through FICUS, the researchers …
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JGI Earth Month: Wetlands Work in #TenHundredWords
… living on a changing planet. Mo Kaze is a University of California (UC), Merced graduate student working with  Susannah … Community Structure and Methane Production in California’s Canal System,” focuses on anthropogenic impacts on wetland microbiome composition and metabolism, work on which she is …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
For many scientists, the culmination of their work into a … my first publication and it feels so rewarding,” Wint said. For Axel Visel, JGI Science Deputy and a co-founder of the … She continued working virtually with her JGI mentors for nearly three years after her internship. “That level of …
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2025 NeLLi Symposium
Immediately following the NeLLi Symposium, join us for a 1.5-day jamboree on November 6-7 focused on improving … of the bacterial, archaeal and microeukaryote diversity cataloged and taxonomically classified to date. Under the “sequence to function’ umbrella, this symposium will further focus on computational …
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Jane Grimwood Named HudsonAlpha Genomics Chair
Spencer Chair in Genomics at the HudsonAlpha Institute for Biotechnology! Loretta Spencer served as a manyterm … to include: A 2021 Nature paper announcing a high-quality reference sequence of the complex switchgrass genome , using … Biotechnology paper on the release of the high quality reference genome sequence of green millet ( Setaria viridis …
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The Expanding Universe of Methane Metabolisms in Archaea
… of the Earth’s atmosphere and regulating the global climate for life to flourish. For Guillaume Borrel and Simonetta Gribaldo of the Institut … , they mined the Integrated Microbial Genomes & Microbiomes (IMG/M) database maintained by the U.S. …
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Draft genome sequences of Butyrivibrio hungatei DSM 14810 (JK 615T) and Butyrivibrio fibrisolvens DSM 3071 (D1T).
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… which could then be converted into sustainable biofuels . For its importance to the DOE mission, switchgrass is among … the University of Texas at Austin produced a high-quality reference sequence of the complex switchgrass genome. The reference genome built off more than a decade of work; as …
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